Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SEA4YBL104C 3117 nt3.46□□□□□ -1.85
TDP1P38319 AAD3YCR107W 1092 nt3.46□□□□□ -1.86
TDP1P38319 SDH7YDR511W 402 nt3.46□□□□□ -1.86
TDP1P38319 YFL065CYFL065C 309 nt3.46□□□□□ -1.86
TDP1P38319 YGR073CYGR073C 372 nt3.46□□□□□ -1.86
TDP1P38319 YLR076CYLR076C 423 nt3.46□□□□□ -1.86
TDP1P38319 RPC40YPR110C 1008 nt3.46□□□□□ -1.86
TDP1P38319 AIP1YMR092C 1848 nt3.46□□□□□ -1.86
TDP1P38319 KAP95YLR347C 2586 nt3.46□□□□□ -1.86
TDP1P38319 TOP1YOL006C 2310 nt3.45□□□□□ -1.86
TDP1P38319 MTR4YJL050W 3222 nt3.45□□□□□ -1.86
TDP1P38319 FLO9YAL063C 3969 nt3.45□□□□□ -1.86
TDP1P38319 SMT3YDR510W 306 nt3.45□□□□□ -1.86
TDP1P38319 YHR063W-AYHR063W-A 336 nt3.45□□□□□ -1.86
TDP1P38319 DFG10YIL049W 762 nt3.45□□□□□ -1.86
TDP1P38319 JLP2YMR132C 627 nt3.45□□□□□ -1.86
TDP1P38319 HHF1YBR009C 312 nt3.45□□□□□ -1.86
TDP1P38319 snR35snR35 204 nt3.45□□□□□ -1.86
TDP1P38319 PEX6YNL329C 3093 nt3.45□□□□□ -1.86
TDP1P38319 TMA108YIL137C 2841 nt3.45□□□□□ -1.86
TDP1P38319 ARG2YJL071W 1725 nt3.44□□□□□ -1.86
TDP1P38319 SPT10YJL127C 1923 nt3.44□□□□□ -1.86
TDP1P38319 SYO1YDL063C 1863 nt3.44□□□□□ -1.86
TDP1P38319 RPS8BYER102W 603 nt3.44□□□□□ -1.86
TDP1P38319 MIC19YFR011C 513 nt3.44□□□□□ -1.86
TDP1P38319 ECO1YFR027W 846 nt3.44□□□□□ -1.86
TDP1P38319 RPL1BYGL135W 654 nt3.44□□□□□ -1.86
TDP1P38319 OTU2YHL013C 924 nt3.44□□□□□ -1.86
TDP1P38319 RPS24BYIL069C 408 nt3.44□□□□□ -1.86
TDP1P38319 YAL037WYAL037W 804 nt3.44□□□□□ -1.86
TDP1P38319 GTT2YLL060C 702 nt3.44□□□□□ -1.86
TDP1P38319 YLR416CYLR416C 399 nt3.44□□□□□ -1.86
TDP1P38319 RAD14YMR201C 1116 nt3.44□□□□□ -1.86
TDP1P38319 RPS8AYBL072C 603 nt3.44□□□□□ -1.86
TDP1P38319 ATX1YNL259C 222 nt3.44□□□□□ -1.86
TDP1P38319 RPL1AYPL220W 654 nt3.44□□□□□ -1.86
TDP1P38319 YPR010C-AYPR010C-A 219 nt3.44□□□□□ -1.86
TDP1P38319 YPR039WYPR039W 336 nt3.44□□□□□ -1.86
TDP1P38319 YPR108W-AYPR108W-A 213 nt3.44□□□□□ -1.86
TDP1P38319 GPI17YDR434W 1605 nt3.44□□□□□ -1.86
TDP1P38319 CCM1YGR150C 2595 nt3.44□□□□□ -1.86
TDP1P38319 KAR9YPL269W 1935 nt3.43□□□□□ -1.86
TDP1P38319 SMX2YFL017W-A 234 nt3.43□□□□□ -1.86
TDP1P38319 RPL11BYGR085C 525 nt3.43□□□□□ -1.86
TDP1P38319 YKL156C-AYKL156C-A 117 nt3.43□□□□□ -1.86
TDP1P38319 TEN1YLR010C 483 nt3.43□□□□□ -1.86
TDP1P38319 RPL11AYPR102C 525 nt3.43□□□□□ -1.86
TDP1P38319 PMT6YGR199W 2280 nt3.43□□□□□ -1.86
TDP1P38319 BRE5YNR051C 1548 nt3.43□□□□□ -1.86
TDP1P38319 STI1YOR027W 1770 nt3.43□□□□□ -1.86
TDP1P38319 XRN1YGL173C 4587 nt3.43□□□□□ -1.86
TDP1P38319 JIP5YPR169W 1479 nt3.42□□□□□ -1.86
TDP1P38319 SCY1YGL083W 2415 nt3.42□□□□□ -1.86
TDP1P38319 SRD1YCR018C 666 nt3.42□□□□□ -1.86
TDP1P38319 YDL009CYDL009C 324 nt3.42□□□□□ -1.86
TDP1P38319 OPI6YDL096C 327 nt3.42□□□□□ -1.86
TDP1P38319 YGL007C-AYGL007C-A 87 nt3.42□□□□□ -1.86
TDP1P38319 TCD1YHR003C 1290 nt3.42□□□□□ -1.86
TDP1P38319 YIL141WYIL141W 390 nt3.42□□□□□ -1.86
TDP1P38319 MRP8YKL142W 660 nt3.42□□□□□ -1.86
TDP1P38319 YLR294CYLR294C 330 nt3.42□□□□□ -1.86
TDP1P38319 YMR320WYMR320W 306 nt3.42□□□□□ -1.86
TDP1P38319 YOL114CYOL114C 609 nt3.42□□□□□ -1.86
TDP1P38319 LTP1YPR073C 486 nt3.42□□□□□ -1.86
TDP1P38319 YBR137WYBR137W 540 nt3.42□□□□□ -1.86
TDP1P38319 PKH1YDR490C 2301 nt3.42□□□□□ -1.86
TDP1P38319 POL4YCR014C 1749 nt3.41□□□□□ -1.86
TDP1P38319 VAC8YEL013W 1737 nt3.41□□□□□ -1.86
TDP1P38319 STP2YHR006W 1626 nt3.41□□□□□ -1.86
TDP1P38319 YPS6YIR039C 1614 nt3.41□□□□□ -1.86
TDP1P38319 tM(CAU)Q1tM(CAU)Q1 76 nt3.41□□□□□ -1.86
TDP1P38319 YGR053CYGR053C 852 nt3.41□□□□□ -1.86
TDP1P38319 VOA1YGR106C 798 nt3.41□□□□□ -1.86
TDP1P38319 LSM1YJL124C 519 nt3.41□□□□□ -1.86
TDP1P38319 RMP1YLR145W 606 nt3.41□□□□□ -1.86
TDP1P38319 ICY1YMR195W 384 nt3.41□□□□□ -1.86
TDP1P38319 VTI1YMR197C 654 nt3.41□□□□□ -1.86
TDP1P38319 YMR290W-AYMR290W-A 348 nt3.41□□□□□ -1.86
TDP1P38319 YNL146C-AYNL146C-A 195 nt3.41□□□□□ -1.86
TDP1P38319 TIR2YOR010C 756 nt3.41□□□□□ -1.86
TDP1P38319 ATP3YBR039W 936 nt3.41□□□□□ -1.86
TDP1P38319 ATP25YMR098C 1839 nt3.41□□□□□ -1.86
TDP1P38319 SRP68YPL243W 1800 nt3.41□□□□□ -1.86
TDP1P38319 ATG26YLR189C 3597 nt3.41□□□□□ -1.86
TDP1P38319 TDA1YMR291W 1761 nt3.4□□□□□ -1.86
TDP1P38319 FAP7YDL166C 594 nt3.4□□□□□ -1.87
TDP1P38319 STE14YDR410C 720 nt3.4□□□□□ -1.87
TDP1P38319 Q0092Q0092 141 nt3.4□□□□□ -1.87
TDP1P38319 YHR212CYHR212C 336 nt3.4□□□□□ -1.87
TDP1P38319 SSM4YIL030C 3960 nt3.4□□□□□ -1.87
TDP1P38319 YAR060CYAR060C 336 nt3.4□□□□□ -1.87
TDP1P38319 VAC14YLR386W 2643 nt3.4□□□□□ -1.87
TDP1P38319 ADI1YMR009W 540 nt3.4□□□□□ -1.87
TDP1P38319 UBC7YMR022W 498 nt3.4□□□□□ -1.87
TDP1P38319 ERP4YOR016C 624 nt3.4□□□□□ -1.87
TDP1P38319 YOP1YPR028W 543 nt3.4□□□□□ -1.87
TDP1P38319 YJL132WYJL132W 2253 nt3.4□□□□□ -1.87
TDP1P38319 DBF20YPR111W 1695 nt3.39□□□□□ -1.87
TDP1P38319 SQS1YNL224C 2304 nt3.39□□□□□ -1.87
TDP1P38319 YGR237CYGR237C 2358 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 32.1 ms