Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDE6BP35913 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.7■■□□□ 1.71
PDE6BP35913 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDE6BP35913 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
PDE6BP35913 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PDE6BP35913 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.7■■□□□ 1.7
PDE6BP35913 AC239809.2-201ENST00000415381 517 ntBASIC25.7■■□□□ 1.7
PDE6BP35913 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PDE6BP35913 MIR4785-201ENST00000585005 73 ntBASIC25.7■■□□□ 1.7
PDE6BP35913 AC120498.8-201ENST00000614275 531 ntBASIC25.7■■□□□ 1.7
PDE6BP35913 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDE6BP35913 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.7■■□□□ 1.7
PDE6BP35913 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
PDE6BP35913 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDE6BP35913 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PDE6BP35913 AC010542.4-201ENST00000563151 1910 ntBASIC25.69■■□□□ 1.7
PDE6BP35913 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDE6BP35913 AC110285.5-201ENST00000611501 352 ntBASIC25.69■■□□□ 1.7
PDE6BP35913 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.69■■□□□ 1.7
PDE6BP35913 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.69■■□□□ 1.7
PDE6BP35913 AC116050.2-201ENST00000612102 1779 ntBASIC25.69■■□□□ 1.7
PDE6BP35913 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.69■■□□□ 1.7
PDE6BP35913 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDE6BP35913 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.69■■□□□ 1.7
PDE6BP35913 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
PDE6BP35913 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.68■■□□□ 1.7
PDE6BP35913 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PDE6BP35913 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDE6BP35913 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.68■■□□□ 1.7
PDE6BP35913 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDE6BP35913 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.68■■□□□ 1.7
PDE6BP35913 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE6BP35913 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.68■■□□□ 1.7
PDE6BP35913 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDE6BP35913 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.68■■□□□ 1.7
PDE6BP35913 CBFB-203ENST00000561924 584 ntTSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 AC133561.5-201ENST00000635547 218 ntBASIC25.68■■□□□ 1.7
PDE6BP35913 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
PDE6BP35913 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.68■■□□□ 1.7
PDE6BP35913 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
PDE6BP35913 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE6BP35913 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.67■■□□□ 1.7
PDE6BP35913 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.67■■□□□ 1.7
PDE6BP35913 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE6BP35913 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
PDE6BP35913 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDE6BP35913 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.67■■□□□ 1.7
PDE6BP35913 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE6BP35913 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
PDE6BP35913 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.67■■□□□ 1.7
PDE6BP35913 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PDE6BP35913 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.67■■□□□ 1.7
PDE6BP35913 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDE6BP35913 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
PDE6BP35913 AC087499.1-201ENST00000418141 1075 ntBASIC25.66■■□□□ 1.7
PDE6BP35913 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.66■■□□□ 1.7
PDE6BP35913 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.66■■□□□ 1.7
PDE6BP35913 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.66■■□□□ 1.7
PDE6BP35913 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDE6BP35913 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.66■■□□□ 1.7
PDE6BP35913 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
PDE6BP35913 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PDE6BP35913 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PDE6BP35913 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.65■■□□□ 1.7
PDE6BP35913 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDE6BP35913 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDE6BP35913 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.64■■□□□ 1.7
PDE6BP35913 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDE6BP35913 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDE6BP35913 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.64■■□□□ 1.7
PDE6BP35913 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.64■■□□□ 1.7
PDE6BP35913 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.64■■□□□ 1.7
PDE6BP35913 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDE6BP35913 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.64■■□□□ 1.7
PDE6BP35913 AC005829.2-201ENST00000571422 1056 ntBASIC25.64■■□□□ 1.7
PDE6BP35913 AC113410.3-201ENST00000623366 203 ntBASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms