Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.77■■□□□ 1.08
RFC1P35251 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFC1P35251 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.77■■□□□ 1.08
RFC1P35251 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RFC1P35251 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.77■■□□□ 1.07
RFC1P35251 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.77■■□□□ 1.07
RFC1P35251 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.76■■□□□ 1.07
RFC1P35251 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.76■■□□□ 1.07
RFC1P35251 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RFC1P35251 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.76■■□□□ 1.07
RFC1P35251 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.76■■□□□ 1.07
RFC1P35251 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RFC1P35251 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.76■■□□□ 1.07
RFC1P35251 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RFC1P35251 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RFC1P35251 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RFC1P35251 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RFC1P35251 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.75■■□□□ 1.07
RFC1P35251 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
RFC1P35251 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.75■■□□□ 1.07
RFC1P35251 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.75■■□□□ 1.07
RFC1P35251 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.75■■□□□ 1.07
RFC1P35251 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.75■■□□□ 1.07
RFC1P35251 SLC7A5P1-201ENST00000568957 537 ntBASIC21.75■■□□□ 1.07
RFC1P35251 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.75■■□□□ 1.07
RFC1P35251 UBE2DNL-204ENST00000602536 740 ntBASIC21.75■■□□□ 1.07
RFC1P35251 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.75■■□□□ 1.07
RFC1P35251 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RFC1P35251 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.75■■□□□ 1.07
RFC1P35251 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RFC1P35251 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RFC1P35251 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 AC245052.3-201ENST00000450182 901 ntBASIC21.74■■□□□ 1.07
RFC1P35251 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.74■■□□□ 1.07
RFC1P35251 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.74■■□□□ 1.07
RFC1P35251 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RFC1P35251 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.74■■□□□ 1.07
RFC1P35251 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RFC1P35251 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
RFC1P35251 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.74■■□□□ 1.07
RFC1P35251 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.73■■□□□ 1.07
RFC1P35251 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.73■■□□□ 1.07
RFC1P35251 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RFC1P35251 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
RFC1P35251 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.73■■□□□ 1.07
RFC1P35251 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.73■■□□□ 1.07
RFC1P35251 AC011484.1-201ENST00000377652 1995 ntBASIC21.73■■□□□ 1.07
RFC1P35251 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.73■■□□□ 1.07
RFC1P35251 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RFC1P35251 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.73■■□□□ 1.07
RFC1P35251 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC1P35251 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 AL157384.1-201ENST00000445995 2473 ntBASIC21.72■■□□□ 1.07
RFC1P35251 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RFC1P35251 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFC1P35251 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RFC1P35251 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.72■■□□□ 1.07
RFC1P35251 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.72■■□□□ 1.07
RFC1P35251 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.72■■□□□ 1.07
RFC1P35251 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.72■■□□□ 1.07
RFC1P35251 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.72■■□□□ 1.07
RFC1P35251 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms