Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 NFE2L2-213ENST00000586532 942 ntTSL 53.91□□□□□ -1.782e-8■■□□□ 13.7
CSTF2P33240 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.412e-7■■□□□ 13.7
CSTF2P33240 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.422e-7■■□□□ 13.7
CSTF2P33240 CAMTA1-209ENST00000476163 863 ntTSL 219.02■□□□□ 0.647e-9■■□□□ 13.7
CSTF2P33240 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.57e-9■■□□□ 13.7
CSTF2P33240 TMEM123-204ENST00000526676 467 ntTSL 415.45■□□□□ 0.068e-13■■□□□ 13.7
CSTF2P33240 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.298e-13■■□□□ 13.7
CSTF2P33240 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.318e-13■■□□□ 13.7
CSTF2P33240 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.48e-13■■□□□ 13.7
CSTF2P33240 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC11.5□□□□□ -0.574e-6■■□□□ 13.7
CSTF2P33240 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC8.5□□□□□ -1.054e-6■■□□□ 13.7
CSTF2P33240 TMEM123-206ENST00000529492 549 ntTSL 23.26□□□□□ -1.898e-13■■□□□ 13.7
CSTF2P33240 TMEM123-205ENST00000528969 568 ntAPPRIS ALT2 TSL 43.05□□□□□ -1.928e-13■■□□□ 13.7
CSTF2P33240 TMEM123-207ENST00000531103 568 ntTSL 42.5□□□□□ -2.018e-13■■□□□ 13.7
CSTF2P33240 TMEM123-203ENST00000525577 550 ntTSL 42.48□□□□□ -2.018e-13■■□□□ 13.7
CSTF2P33240 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.25■□□□□ 0.835e-6■■□□□ 13.6
CSTF2P33240 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.395e-6■■□□□ 13.6
CSTF2P33240 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.45e-6■■□□□ 13.6
CSTF2P33240 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.775e-6■■□□□ 13.6
CSTF2P33240 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.285e-6■■□□□ 13.6
CSTF2P33240 DRAM1-204ENST00000549066 427 ntTSL 33.45□□□□□ -1.864e-6■■□□□ 13.6
CSTF2P33240 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.93□□□□□ -0.183e-7■■□□□ 13.6
CSTF2P33240 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC11.88□□□□□ -0.513e-7■■□□□ 13.6
CSTF2P33240 PVT1-208ENST00000519481 542 ntTSL 210.83□□□□□ -0.683e-7■■□□□ 13.6
CSTF2P33240 PVT1-206ENST00000517838 518 ntTSL 27.2□□□□□ -1.263e-7■■□□□ 13.6
CSTF2P33240 PSMG4-210ENST00000509933 2241 ntTSL 213.49□□□□□ -0.251e-6■■□□□ 13.6
CSTF2P33240 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.842e-7■■□□□ 13.6
CSTF2P33240 XYLB-202ENST00000424034 3484 ntTSL 28.9□□□□□ -0.992e-7■■□□□ 13.6
CSTF2P33240 EML4-208ENST00000482660 584 ntTSL 417.6■□□□□ 0.416e-11■■□□□ 13.6
CSTF2P33240 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.161e-8■■□□□ 13.6
CSTF2P33240 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.291e-8■■□□□ 13.6
CSTF2P33240 COG5-209ENST00000484237 574 ntTSL 45.69□□□□□ -1.51e-8■■□□□ 13.6
CSTF2P33240 ROCK2-204ENST00000431087 729 ntTSL 35.25□□□□□ -1.571e-8■■□□□ 13.6
CSTF2P33240 HPN-207ENST00000599363 1828 ntTSL 520.11■□□□□ 0.817e-9■■□□□ 13.6
CSTF2P33240 HPN-204ENST00000593305 2175 ntTSL 218.98■□□□□ 0.637e-9■■□□□ 13.6
CSTF2P33240 HPN-203ENST00000541345 1820 ntTSL 216.47■□□□□ 0.237e-9■■□□□ 13.6
CSTF2P33240 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.127e-9■■□□□ 13.6
CSTF2P33240 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -07e-9■■□□□ 13.6
CSTF2P33240 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.91□□□□□ -0.187e-9■■□□□ 13.6
CSTF2P33240 UBC-203ENST00000535859 582 ntTSL 213.28□□□□□ -0.284e-6■■□□□ 13.5
CSTF2P33240 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.812e-8■■□□□ 13.5
CSTF2P33240 TNS3-205ENST00000434451 560 ntTSL 516.37■□□□□ 0.213e-6■■□□□ 13.5
CSTF2P33240 TNS3-208ENST00000457718 3836 ntTSL 510.48□□□□□ -0.733e-6■■□□□ 13.5
CSTF2P33240 C9orf3-207ENST00000445181 873 ntTSL 323.33■■□□□ 1.332e-6■■□□□ 13.5
CSTF2P33240 C9orf3-216ENST00000478603 802 ntTSL 222.56■■□□□ 1.22e-6■■□□□ 13.5
CSTF2P33240 ZNF248-206ENST00000485560 1705 ntTSL 1 (best)15.24■□□□□ 0.031e-8■■□□□ 13.5
CSTF2P33240 PPP2R2D-203ENST00000472664 770 ntTSL 314.07□□□□□ -0.161e-8■■□□□ 13.5
CSTF2P33240 AC098617.1-201ENST00000424116 500 ntTSL 212.83□□□□□ -0.361e-8■■□□□ 13.5
CSTF2P33240 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-8■■□□□ 13.5
CSTF2P33240 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC8.69□□□□□ -1.021e-8■■□□□ 13.5
CSTF2P33240 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC8.21□□□□□ -1.11e-8■■□□□ 13.5
CSTF2P33240 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.01□□□□□ -1.451e-8■■□□□ 13.5
CSTF2P33240 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.541e-8■■□□□ 13.5
CSTF2P33240 SOS1-205ENST00000461545 441 ntTSL 32.3□□□□□ -2.046e-6■■□□□ 13.5
CSTF2P33240 PPP2R2D-206ENST00000517472 573 ntTSL 32.16□□□□□ -2.061e-8■■□□□ 13.5
CSTF2P33240 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.679e-8■■□□□ 13.4
CSTF2P33240 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.019e-8■■□□□ 13.4
CSTF2P33240 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.049e-8■■□□□ 13.4
CSTF2P33240 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.249e-8■■□□□ 13.4
CSTF2P33240 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.259e-8■■□□□ 13.4
CSTF2P33240 PLD1-206ENST00000446289 839 ntTSL 1 (best)5.65□□□□□ -1.52e-8■■□□□ 13.4
CSTF2P33240 PLD1-209ENST00000465816 701 ntTSL 34.99□□□□□ -1.612e-8■■□□□ 13.4
CSTF2P33240 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.91■■□□□ 1.19e-12■■□□□ 13.4
CSTF2P33240 FRYL-203ENST00000502520 441 ntTSL 217.84■□□□□ 0.453e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.433e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.47■□□□□ 0.233e-8■■□□□ 13.4
CSTF2P33240 FRYL-219ENST00000515684 465 ntTSL 316.33■□□□□ 0.23e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-210ENST00000453643 818 ntTSL 515.78■□□□□ 0.123e-8■■□□□ 13.4
CSTF2P33240 FRYL-218ENST00000514783 2031 ntTSL 1 (best)15.69■□□□□ 0.13e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.043e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.083e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-206ENST00000418133 622 ntTSL 513.08□□□□□ -0.323e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.59□□□□□ -0.393e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-207ENST00000422336 664 ntTSL 511.93□□□□□ -0.53e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-208ENST00000445706 511 ntTSL 511.82□□□□□ -0.523e-8■■□□□ 13.4
CSTF2P33240 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.58□□□□□ -1.23e-8■■□□□ 13.4
CSTF2P33240 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.333e-8■■□□□ 13.4
CSTF2P33240 PRR4-209ENST00000541456 454 ntTSL 34.5□□□□□ -1.693e-8■■□□□ 13.4
CSTF2P33240 PACSIN2-209ENST00000453079 505 ntTSL 24.48□□□□□ -1.693e-8■■□□□ 13.4
CSTF2P33240 FRYL-212ENST00000509886 692 ntTSL 1 (best)3.88□□□□□ -1.793e-8■■□□□ 13.4
CSTF2P33240 PRR4-202ENST00000534923 533 ntTSL 23.03□□□□□ -1.923e-8■■□□□ 13.4
CSTF2P33240 FRYL-207ENST00000505437 443 ntTSL 32.24□□□□□ -2.053e-8■■□□□ 13.4
CSTF2P33240 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.67□□□□□ -0.061e-11■■□□□ 13.4
CSTF2P33240 PAPOLA-204ENST00000553461 892 ntTSL 23.62□□□□□ -1.831e-11■■□□□ 13.4
CSTF2P33240 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.231e-6■■□□□ 13.4
CSTF2P33240 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.411e-6■■□□□ 13.4
CSTF2P33240 RERE-213ENST00000480342 2710 ntTSL 29.46□□□□□ -0.91e-6■■□□□ 13.4
CSTF2P33240 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.55□□□□□ -1.21e-6■■□□□ 13.4
CSTF2P33240 RERE-218ENST00000514428 273 ntTSL 31.74□□□□□ -2.131e-6■■□□□ 13.4
CSTF2P33240 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.35□□□□□ -1.396e-8■■□□□ 13.4
CSTF2P33240 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.626e-8■■□□□ 13.4
CSTF2P33240 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.81■□□□□ 0.445e-6■■□□□ 13.3
CSTF2P33240 PLD1-216ENST00000498278 996 ntTSL 55.67□□□□□ -1.58e-8■■□□□ 13.3
CSTF2P33240 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.79e-8■■□□□ 13.3
CSTF2P33240 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.46■□□□□ 0.079e-8■■□□□ 13.3
CSTF2P33240 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.219e-8■■□□□ 13.3
CSTF2P33240 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.16□□□□□ -0.469e-8■■□□□ 13.3
CSTF2P33240 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)10.87□□□□□ -0.679e-8■■□□□ 13.3
CSTF2P33240 ARID4B-209ENST00000471257 4195 ntTSL 56.17□□□□□ -1.429e-8■■□□□ 13.3
CSTF2P33240 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.23■□□□□ 0.992e-8■■□□□ 13.3
Retrieved 100 of 6,735 protein–RNA pairs in 192.2 ms