Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHMP24386 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP24386 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP24386 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP24386 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP24386 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMP24386 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP24386 AC004854.2-201ENST00000608450 1441 ntBASIC19.28■□□□□ 0.68
CHMP24386 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP24386 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP24386 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP24386 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP24386 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP24386 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP24386 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP24386 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CHMP24386 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHMP24386 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP24386 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.27■□□□□ 0.68
CHMP24386 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.27■□□□□ 0.68
CHMP24386 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP24386 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP24386 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CHMP24386 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP24386 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP24386 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHMP24386 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP24386 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHMP24386 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP24386 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP24386 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP24386 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP24386 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CHMP24386 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CHMP24386 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP24386 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP24386 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP24386 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP24386 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.25■□□□□ 0.67
CHMP24386 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP24386 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHMP24386 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP24386 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP24386 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CHMP24386 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP24386 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP24386 KRT18P61-201ENST00000585825 1298 ntBASIC19.25■□□□□ 0.67
CHMP24386 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CHMP24386 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP24386 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
CHMP24386 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP24386 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CHMP24386 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP24386 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP24386 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP24386 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP24386 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP24386 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP24386 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.24■□□□□ 0.67
CHMP24386 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP24386 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHMP24386 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP24386 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP24386 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms