Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS4Y1P22090 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS4Y1P22090 FP700111.2-201ENST00000619190 1892 ntBASIC18.97■□□□□ 0.63
RPS4Y1P22090 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 AC116050.2-201ENST00000612102 1779 ntBASIC18.96■□□□□ 0.63
RPS4Y1P22090 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 AC091799.1-201ENST00000422823 811 ntBASIC18.96■□□□□ 0.63
RPS4Y1P22090 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPS4Y1P22090 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS4Y1P22090 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 AC073130.3-201ENST00000624389 2278 ntBASIC18.95■□□□□ 0.62
RPS4Y1P22090 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 MIR6821-201ENST00000617625 74 ntBASIC18.95■□□□□ 0.62
RPS4Y1P22090 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 AC020907.5-201ENST00000624372 1936 ntBASIC18.95■□□□□ 0.62
RPS4Y1P22090 AC092667.1-201ENST00000434301 2586 ntBASIC18.95■□□□□ 0.62
RPS4Y1P22090 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS4Y1P22090 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
RPS4Y1P22090 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 AC034268.1-201ENST00000441047 882 ntBASIC18.94■□□□□ 0.62
RPS4Y1P22090 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.94■□□□□ 0.62
RPS4Y1P22090 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS4Y1P22090 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4Y1P22090 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4Y1P22090 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms