Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN1P18031 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN1P18031 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTPN1P18031 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.96■■□□□ 1.11
PTPN1P18031 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PTPN1P18031 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PTPN1P18031 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN1P18031 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTPN1P18031 MKRN4P-201ENST00000444706 1521 ntBASIC21.96■■□□□ 1.11
PTPN1P18031 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTPN1P18031 AL355802.2-201ENST00000402069 882 ntBASIC21.95■■□□□ 1.1
PTPN1P18031 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PTPN1P18031 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.95■■□□□ 1.1
PTPN1P18031 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.95■■□□□ 1.1
PTPN1P18031 FEM1AP4-201ENST00000443167 1987 ntBASIC21.95■■□□□ 1.1
PTPN1P18031 AC010980.2-201ENST00000587099 1412 ntBASIC21.95■■□□□ 1.1
PTPN1P18031 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.95■■□□□ 1.1
PTPN1P18031 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PTPN1P18031 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.94■■□□□ 1.1
PTPN1P18031 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.94■■□□□ 1.1
PTPN1P18031 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.94■■□□□ 1.1
PTPN1P18031 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.94■■□□□ 1.1
PTPN1P18031 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN1P18031 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PTPN1P18031 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.94■■□□□ 1.1
PTPN1P18031 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTPN1P18031 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTPN1P18031 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
PTPN1P18031 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.93■■□□□ 1.1
PTPN1P18031 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.93■■□□□ 1.1
PTPN1P18031 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.93■■□□□ 1.1
PTPN1P18031 AL049796.1-201ENST00000565336 1766 ntBASIC21.93■■□□□ 1.1
PTPN1P18031 AL138781.1-201ENST00000566567 1274 ntBASIC21.93■■□□□ 1.1
PTPN1P18031 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.93■■□□□ 1.1
PTPN1P18031 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
PTPN1P18031 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN1P18031 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN1P18031 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN1P18031 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTPN1P18031 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.92■■□□□ 1.1
PTPN1P18031 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 AC142086.2-201ENST00000569753 217 ntBASIC21.92■■□□□ 1.1
PTPN1P18031 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.92■■□□□ 1.1
PTPN1P18031 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.92■■□□□ 1.1
PTPN1P18031 AC026310.3-201ENST00000625186 2373 ntBASIC21.92■■□□□ 1.1
PTPN1P18031 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN1P18031 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTPN1P18031 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.91■■□□□ 1.1
PTPN1P18031 MIPEPP3-201ENST00000412105 444 ntBASIC21.91■■□□□ 1.1
PTPN1P18031 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.91■■□□□ 1.1
PTPN1P18031 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PTPN1P18031 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PTPN1P18031 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PTPN1P18031 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PTPN1P18031 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.9■■□□□ 1.1
PTPN1P18031 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PTPN1P18031 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.9■■□□□ 1.1
PTPN1P18031 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.9■■□□□ 1.1
PTPN1P18031 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.9■■□□□ 1.1
PTPN1P18031 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.9■■□□□ 1.1
PTPN1P18031 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 AC100791.3-201ENST00000617619 330 ntBASIC21.9■■□□□ 1.1
PTPN1P18031 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.9■■□□□ 1.1
PTPN1P18031 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PTPN1P18031 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.89■■□□□ 1.1
PTPN1P18031 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN1P18031 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
PTPN1P18031 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN1P18031 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN1P18031 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PTPN1P18031 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN1P18031 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN1P18031 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN1P18031 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PTPN1P18031 BX276092.2-201ENST00000417668 665 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms