Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 AC142381.2-201ENST00000566120 298 ntBASIC18.54■□□□□ 0.56
HIST1H1CP16403 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 AL391422.3-201ENST00000603791 2761 ntBASIC18.54■□□□□ 0.56
HIST1H1CP16403 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H1CP16403 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HIST1H1CP16403 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 AC079140.4-201ENST00000507448 529 ntBASIC18.53■□□□□ 0.56
HIST1H1CP16403 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 AC008175.2-201ENST00000612840 297 ntBASIC18.53■□□□□ 0.56
HIST1H1CP16403 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.53■□□□□ 0.56
HIST1H1CP16403 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H1CP16403 KRT87P-202ENST00000534226 1464 ntBASIC18.52■□□□□ 0.56
HIST1H1CP16403 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST1H1CP16403 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HIST1H1CP16403 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.52■□□□□ 0.55
HIST1H1CP16403 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
HIST1H1CP16403 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H1CP16403 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.52■□□□□ 0.55
HIST1H1CP16403 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST1H1CP16403 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.52■□□□□ 0.55
HIST1H1CP16403 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.52■□□□□ 0.55
HIST1H1CP16403 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1CP16403 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 POU5F1P4-201ENST00000413175 1085 ntBASIC18.51■□□□□ 0.55
HIST1H1CP16403 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1CP16403 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1CP16403 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HIST1H1CP16403 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIST1H1CP16403 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 PCDHAC2-203ENST00000615316 3011 ntBASIC18.5■□□□□ 0.55
HIST1H1CP16403 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms