Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 AC090192.1-201ENST00000517740 490 ntBASIC21.7■■□□□ 1.06
PDGFRAP16234 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 AC080038.1-201ENST00000611274 1154 ntBASIC21.7■■□□□ 1.06
PDGFRAP16234 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
PDGFRAP16234 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFRAP16234 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDGFRAP16234 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.7■■□□□ 1.06
PDGFRAP16234 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.69■■□□□ 1.06
PDGFRAP16234 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
PDGFRAP16234 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PDGFRAP16234 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.69■■□□□ 1.06
PDGFRAP16234 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 RBM17P2-201ENST00000616397 1405 ntBASIC21.69■■□□□ 1.06
PDGFRAP16234 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PDGFRAP16234 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDGFRAP16234 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFRAP16234 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFRAP16234 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFRAP16234 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFRAP16234 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFRAP16234 AC243732.1-201ENST00000612648 864 ntBASIC21.68■■□□□ 1.06
PDGFRAP16234 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.68■■□□□ 1.06
PDGFRAP16234 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDGFRAP16234 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PDGFRAP16234 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.68■■□□□ 1.06
PDGFRAP16234 AC006128.1-201ENST00000624704 1661 ntBASIC21.68■■□□□ 1.06
PDGFRAP16234 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.68■■□□□ 1.06
PDGFRAP16234 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.68■■□□□ 1.06
PDGFRAP16234 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PDGFRAP16234 AC011484.1-201ENST00000377652 1995 ntBASIC21.67■■□□□ 1.06
PDGFRAP16234 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.67■■□□□ 1.06
PDGFRAP16234 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.67■■□□□ 1.06
PDGFRAP16234 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 AC011767.1-201ENST00000617410 1153 ntBASIC21.67■■□□□ 1.06
PDGFRAP16234 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.67■■□□□ 1.06
PDGFRAP16234 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PDGFRAP16234 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDGFRAP16234 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFRAP16234 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.66■■□□□ 1.06
PDGFRAP16234 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PDGFRAP16234 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PDGFRAP16234 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.66■■□□□ 1.06
PDGFRAP16234 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFRAP16234 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.66■■□□□ 1.06
PDGFRAP16234 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDGFRAP16234 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFRAP16234 MFSD11-216ENST00000590393 1141 ntBASIC21.65■■□□□ 1.06
PDGFRAP16234 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFRAP16234 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDGFRAP16234 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFRAP16234 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFRAP16234 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.64■■□□□ 1.06
PDGFRAP16234 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
PDGFRAP16234 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.64■■□□□ 1.06
PDGFRAP16234 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.64■■□□□ 1.06
PDGFRAP16234 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFRAP16234 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms