Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACANP16112 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACANP16112 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ACANP16112 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.11■□□□□ 0.33
ACANP16112 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ACANP16112 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACANP16112 AC091799.1-201ENST00000422823 811 ntBASIC17.11■□□□□ 0.33
ACANP16112 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
ACANP16112 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.1■□□□□ 0.33
ACANP16112 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ACANP16112 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ACANP16112 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.1■□□□□ 0.33
ACANP16112 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.1■□□□□ 0.33
ACANP16112 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ACANP16112 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ACANP16112 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACANP16112 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.1■□□□□ 0.33
ACANP16112 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.1■□□□□ 0.33
ACANP16112 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
ACANP16112 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 AC003102.1-202ENST00000563394 1796 ntBASIC17.09■□□□□ 0.33
ACANP16112 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ACANP16112 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ACANP16112 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ACANP16112 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ACANP16112 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.09■□□□□ 0.33
ACANP16112 TPM4P1-201ENST00000436100 807 ntBASIC17.09■□□□□ 0.33
ACANP16112 CDV3P1-201ENST00000471403 739 ntBASIC17.09■□□□□ 0.33
ACANP16112 KRT126P-201ENST00000549467 1181 ntBASIC17.09■□□□□ 0.33
ACANP16112 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.09■□□□□ 0.33
ACANP16112 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.09■□□□□ 0.33
ACANP16112 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACANP16112 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ACANP16112 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ACANP16112 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACANP16112 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.08■□□□□ 0.33
ACANP16112 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACANP16112 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.08■□□□□ 0.33
ACANP16112 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.08■□□□□ 0.33
ACANP16112 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ACANP16112 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.08■□□□□ 0.32
ACANP16112 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.08■□□□□ 0.32
ACANP16112 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.08■□□□□ 0.32
ACANP16112 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACANP16112 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ACANP16112 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ACANP16112 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.07■□□□□ 0.32
ACANP16112 NUDT16P1-203ENST00000513809 620 ntBASIC17.07■□□□□ 0.32
ACANP16112 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACANP16112 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACANP16112 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ACANP16112 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACANP16112 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.07■□□□□ 0.32
ACANP16112 AC245052.3-201ENST00000450182 901 ntBASIC17.07■□□□□ 0.32
ACANP16112 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.07■□□□□ 0.32
ACANP16112 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ACANP16112 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ACANP16112 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.07■□□□□ 0.32
ACANP16112 C11orf96-202ENST00000528572 1834 ntBASIC17.07■□□□□ 0.32
ACANP16112 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACANP16112 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACANP16112 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.06■□□□□ 0.32
ACANP16112 TERF1P1-201ENST00000311003 1181 ntBASIC17.06■□□□□ 0.32
ACANP16112 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACANP16112 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.06■□□□□ 0.32
ACANP16112 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.06■□□□□ 0.32
ACANP16112 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.06■□□□□ 0.32
ACANP16112 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
ACANP16112 WWOX-216ENST00000569818 525 ntBASIC17.06■□□□□ 0.32
ACANP16112 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.06■□□□□ 0.32
ACANP16112 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.06■□□□□ 0.32
ACANP16112 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms