Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TIMP2P16035 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TIMP2P16035 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP2P16035 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TIMP2P16035 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP2P16035 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP2P16035 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TIMP2P16035 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP2P16035 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.7■□□□□ 0.9
TIMP2P16035 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP2P16035 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP2P16035 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMP2P16035 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP2P16035 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
TIMP2P16035 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP2P16035 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
TIMP2P16035 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TIMP2P16035 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.69■□□□□ 0.9
TIMP2P16035 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
TIMP2P16035 AC092118.2-201ENST00000613495 667 ntBASIC20.69■□□□□ 0.9
TIMP2P16035 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TIMP2P16035 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMP2P16035 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TIMP2P16035 FEM1AP4-201ENST00000443167 1987 ntBASIC20.68■□□□□ 0.9
TIMP2P16035 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TIMP2P16035 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 MCRIP2P1-201ENST00000394346 511 ntBASIC20.68■□□□□ 0.9
TIMP2P16035 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP2P16035 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP2P16035 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP2P16035 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP2P16035 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 CYP2T3P-201ENST00000601990 817 ntBASIC20.68■□□□□ 0.9
TIMP2P16035 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.68■□□□□ 0.9
TIMP2P16035 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TIMP2P16035 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.68■□□□□ 0.9
TIMP2P16035 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMP2P16035 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TIMP2P16035 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP2P16035 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TIMP2P16035 AL049796.1-201ENST00000565336 1766 ntBASIC20.67■□□□□ 0.9
TIMP2P16035 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
TIMP2P16035 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TIMP2P16035 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.67■□□□□ 0.9
TIMP2P16035 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP2P16035 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP2P16035 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP2P16035 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.67■□□□□ 0.9
TIMP2P16035 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TIMP2P16035 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TIMP2P16035 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TIMP2P16035 KRT17P1-201ENST00000399211 1546 ntBASIC20.67■□□□□ 0.9
TIMP2P16035 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMP2P16035 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.67■□□□□ 0.9
TIMP2P16035 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP2P16035 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP2P16035 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.66■□□□□ 0.9
TIMP2P16035 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP2P16035 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP2P16035 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP2P16035 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMP2P16035 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP2P16035 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP2P16035 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP2P16035 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP2P16035 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP2P16035 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.65■□□□□ 0.9
TIMP2P16035 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP2P16035 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP2P16035 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms