Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.07■□□□□ 0.96
COL4A2P08572 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A2P08572 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.07■□□□□ 0.96
COL4A2P08572 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.07■□□□□ 0.96
COL4A2P08572 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.07■□□□□ 0.96
COL4A2P08572 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 AL355075.4-201ENST00000554988 638 ntBASIC21.07■□□□□ 0.96
COL4A2P08572 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A2P08572 AC233702.5-201ENST00000584107 538 ntBASIC21.07■□□□□ 0.96
COL4A2P08572 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A2P08572 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
COL4A2P08572 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 RPS2P55-201ENST00000397318 883 ntBASIC21.06■□□□□ 0.96
COL4A2P08572 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.06■□□□□ 0.96
COL4A2P08572 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.06■□□□□ 0.96
COL4A2P08572 AC107956.1-201ENST00000494359 873 ntBASIC21.06■□□□□ 0.96
COL4A2P08572 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.06■□□□□ 0.96
COL4A2P08572 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A2P08572 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.05■□□□□ 0.96
COL4A2P08572 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 TSPY7P-201ENST00000431358 1114 ntBASIC21.05■□□□□ 0.96
COL4A2P08572 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
COL4A2P08572 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COL4A2P08572 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 AL356652.1-201ENST00000615962 565 ntBASIC21.05■□□□□ 0.96
COL4A2P08572 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.05■□□□□ 0.96
COL4A2P08572 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.05■□□□□ 0.96
COL4A2P08572 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A2P08572 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A2P08572 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A2P08572 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A2P08572 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A2P08572 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A2P08572 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A2P08572 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A2P08572 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL4A2P08572 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A2P08572 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A2P08572 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.03■□□□□ 0.96
COL4A2P08572 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.03■□□□□ 0.96
COL4A2P08572 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.03■□□□□ 0.96
COL4A2P08572 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.03■□□□□ 0.96
COL4A2P08572 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL4A2P08572 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A2P08572 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.03■□□□□ 0.96
COL4A2P08572 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.02■□□□□ 0.96
COL4A2P08572 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL4A2P08572 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
COL4A2P08572 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
COL4A2P08572 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 AC239809.2-201ENST00000415381 517 ntBASIC21.02■□□□□ 0.96
COL4A2P08572 AL049637.2-201ENST00000641778 930 ntBASIC21.02■□□□□ 0.96
COL4A2P08572 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A2P08572 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.02■□□□□ 0.96
COL4A2P08572 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.02■□□□□ 0.95
COL4A2P08572 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A2P08572 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COL4A2P08572 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL4A2P08572 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
COL4A2P08572 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.01■□□□□ 0.95
COL4A2P08572 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A2P08572 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A2P08572 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms