Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC1P07992 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC1P07992 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.27■□□□□ 0.51
ERCC1P07992 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.27■□□□□ 0.51
ERCC1P07992 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ERCC1P07992 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC1P07992 AC003102.1-202ENST00000563394 1796 ntBASIC18.27■□□□□ 0.51
ERCC1P07992 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC1P07992 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC1P07992 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ERCC1P07992 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC1P07992 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERCC1P07992 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC1P07992 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC1P07992 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC1P07992 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 AP004607.4-201ENST00000530158 1459 ntBASIC18.26■□□□□ 0.51
ERCC1P07992 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC1P07992 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC1P07992 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ERCC1P07992 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC1P07992 AC004854.2-201ENST00000608450 1441 ntBASIC18.25■□□□□ 0.51
ERCC1P07992 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 AC090192.1-201ENST00000517740 490 ntBASIC18.25■□□□□ 0.51
ERCC1P07992 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC1P07992 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC1P07992 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC1P07992 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
ERCC1P07992 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
ERCC1P07992 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.24■□□□□ 0.51
ERCC1P07992 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 AL121603.2-201ENST00000557373 2117 ntBASIC18.24■□□□□ 0.51
ERCC1P07992 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.24■□□□□ 0.51
ERCC1P07992 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ERCC1P07992 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ERCC1P07992 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.23■□□□□ 0.51
ERCC1P07992 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC1P07992 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.23■□□□□ 0.51
ERCC1P07992 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC1P07992 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.23■□□□□ 0.51
ERCC1P07992 BID-214ENST00000617586 542 ntTSL 5 BASIC18.23■□□□□ 0.51
ERCC1P07992 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ERCC1P07992 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ERCC1P07992 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.22■□□□□ 0.51
ERCC1P07992 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC1P07992 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms