Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGN1P05114 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HMGN1P05114 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGN1P05114 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGN1P05114 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGN1P05114 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HMGN1P05114 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGN1P05114 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 UNC93B3-201ENST00000308076 687 ntBASIC18.69■□□□□ 0.58
HMGN1P05114 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGN1P05114 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGN1P05114 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGN1P05114 AC105233.4-201ENST00000642045 216 ntBASIC18.69■□□□□ 0.58
HMGN1P05114 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HMGN1P05114 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGN1P05114 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGN1P05114 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HMGN1P05114 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGN1P05114 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HMGN1P05114 FP700111.2-201ENST00000619190 1892 ntBASIC18.69■□□□□ 0.58
HMGN1P05114 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGN1P05114 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGN1P05114 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMGN1P05114 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HMGN1P05114 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMGN1P05114 AL136116.3-201ENST00000402907 1138 ntBASIC18.68■□□□□ 0.58
HMGN1P05114 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGN1P05114 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMGN1P05114 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMGN1P05114 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGN1P05114 BX005040.4-201ENST00000637145 1518 ntBASIC18.68■□□□□ 0.58
HMGN1P05114 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGN1P05114 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 AC011484.1-201ENST00000377652 1995 ntBASIC18.68■□□□□ 0.58
HMGN1P05114 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGN1P05114 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGN1P05114 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMGN1P05114 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGN1P05114 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGN1P05114 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGN1P05114 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGN1P05114 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGN1P05114 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGN1P05114 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGN1P05114 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
HMGN1P05114 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGN1P05114 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.66■□□□□ 0.58
HMGN1P05114 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGN1P05114 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGN1P05114 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGN1P05114 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGN1P05114 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGN1P05114 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms