Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 AC136469.2-201ENST00000623944 1028 ntBASIC15.72■□□□□ 0.11
TCRAP04437 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRAP04437 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRAP04437 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRAP04437 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRAP04437 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 SYT6-210ENST00000641643 1587 ntBASIC15.71■□□□□ 0.11
TCRAP04437 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
TCRAP04437 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.71■□□□□ 0.11
TCRAP04437 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TCRAP04437 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 AC099778.1-201ENST00000568593 1911 ntBASIC15.71■□□□□ 0.11
TCRAP04437 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 SERBP1P1-201ENST00000396021 1160 ntBASIC15.71■□□□□ 0.11
TCRAP04437 SMUG1P1-201ENST00000590640 811 ntBASIC15.71■□□□□ 0.11
TCRAP04437 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRAP04437 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRAP04437 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TCRAP04437 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRAP04437 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.71■□□□□ 0.1
TCRAP04437 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.71■□□□□ 0.1
TCRAP04437 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRAP04437 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TCRAP04437 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.71■□□□□ 0.1
TCRAP04437 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
TCRAP04437 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRAP04437 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TCRAP04437 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRAP04437 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRAP04437 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRAP04437 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.7■□□□□ 0.1
TCRAP04437 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 DUX4L19-201ENST00000557448 1267 ntBASIC15.7■□□□□ 0.1
TCRAP04437 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRAP04437 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRAP04437 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRAP04437 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRAP04437 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRAP04437 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TCRAP04437 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.69■□□□□ 0.1
TCRAP04437 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
TCRAP04437 AC011298.3-201ENST00000615796 283 ntBASIC15.69■□□□□ 0.1
TCRAP04437 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TCRAP04437 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TCRAP04437 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TCRAP04437 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TCRAP04437 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TCRAP04437 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TCRAP04437 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.68■□□□□ 0.1
TCRAP04437 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRAP04437 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRAP04437 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TCRAP04437 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TCRAP04437 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TCRAP04437 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRAP04437 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms