Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.09■■□□□ 1.61
COL1A1P02452 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
COL1A1P02452 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.08■■□□□ 1.61
COL1A1P02452 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL1A1P02452 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.08■■□□□ 1.61
COL1A1P02452 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.08■■□□□ 1.61
COL1A1P02452 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL1A1P02452 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL1A1P02452 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL1A1P02452 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL1A1P02452 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.08■■□□□ 1.6
COL1A1P02452 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL1A1P02452 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL1A1P02452 AL596275.1-201ENST00000423464 877 ntBASIC25.08■■□□□ 1.6
COL1A1P02452 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.08■■□□□ 1.6
COL1A1P02452 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.08■■□□□ 1.6
COL1A1P02452 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.08■■□□□ 1.6
COL1A1P02452 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL1A1P02452 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.07■■□□□ 1.6
COL1A1P02452 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.07■■□□□ 1.6
COL1A1P02452 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A1P02452 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.07■■□□□ 1.6
COL1A1P02452 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.06■■□□□ 1.6
COL1A1P02452 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.06■■□□□ 1.6
COL1A1P02452 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.06■■□□□ 1.6
COL1A1P02452 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.06■■□□□ 1.6
COL1A1P02452 RPS2P4-201ENST00000476944 856 ntBASIC25.06■■□□□ 1.6
COL1A1P02452 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 AC105020.6-201ENST00000621523 1217 ntBASIC25.06■■□□□ 1.6
COL1A1P02452 AC073648.6-201ENST00000641589 218 ntBASIC25.06■■□□□ 1.6
COL1A1P02452 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
COL1A1P02452 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.06■■□□□ 1.6
COL1A1P02452 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A1P02452 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A1P02452 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A1P02452 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A1P02452 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.05■■□□□ 1.6
COL1A1P02452 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A1P02452 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.05■■□□□ 1.6
COL1A1P02452 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A1P02452 AC116050.2-201ENST00000612102 1779 ntBASIC25.05■■□□□ 1.6
COL1A1P02452 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.04■■□□□ 1.6
COL1A1P02452 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL1A1P02452 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.04■■□□□ 1.6
COL1A1P02452 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL1A1P02452 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A1P02452 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC25.03■■□□□ 1.6
COL1A1P02452 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.03■■□□□ 1.6
COL1A1P02452 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A1P02452 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A1P02452 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.02■■□□□ 1.6
COL1A1P02452 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
COL1A1P02452 AC060766.5-201ENST00000590539 871 ntBASIC25.02■■□□□ 1.6
COL1A1P02452 AL589743.5-201ENST00000616611 1050 ntBASIC25.02■■□□□ 1.6
COL1A1P02452 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.02■■□□□ 1.6
COL1A1P02452 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.02■■□□□ 1.6
COL1A1P02452 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.02■■□□□ 1.6
COL1A1P02452 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.02■■□□□ 1.6
COL1A1P02452 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
COL1A1P02452 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A1P02452 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms