Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
C1RP00736 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.85■■□□□ 1.09
C1RP00736 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.85■■□□□ 1.09
C1RP00736 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
C1RP00736 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.85■■□□□ 1.09
C1RP00736 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
C1RP00736 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.85■■□□□ 1.09
C1RP00736 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.85■■□□□ 1.09
C1RP00736 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
C1RP00736 AL359736.2-201ENST00000621992 437 ntBASIC21.85■■□□□ 1.09
C1RP00736 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C1RP00736 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
C1RP00736 CYP21A1P-202ENST00000354927 1481 ntBASIC21.84■■□□□ 1.09
C1RP00736 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.84■■□□□ 1.09
C1RP00736 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.84■■□□□ 1.09
C1RP00736 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
C1RP00736 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.84■■□□□ 1.09
C1RP00736 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.84■■□□□ 1.09
C1RP00736 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.84■■□□□ 1.09
C1RP00736 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C1RP00736 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.83■■□□□ 1.09
C1RP00736 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.83■■□□□ 1.09
C1RP00736 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.83■■□□□ 1.09
C1RP00736 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
C1RP00736 AC008550.1-201ENST00000511500 884 ntBASIC21.83■■□□□ 1.09
C1RP00736 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.83■■□□□ 1.09
C1RP00736 RN7SL471P-201ENST00000580476 299 ntBASIC21.83■■□□□ 1.09
C1RP00736 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.83■■□□□ 1.09
C1RP00736 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.83■■□□□ 1.09
C1RP00736 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
C1RP00736 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
C1RP00736 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
C1RP00736 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
C1RP00736 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
C1RP00736 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.83■■□□□ 1.08
C1RP00736 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
C1RP00736 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
C1RP00736 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.83■■□□□ 1.08
C1RP00736 AC092368.3-202ENST00000574180 1591 ntBASIC21.82■■□□□ 1.08
C1RP00736 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
C1RP00736 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
C1RP00736 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
C1RP00736 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.82■■□□□ 1.08
C1RP00736 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.82■■□□□ 1.08
C1RP00736 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.82■■□□□ 1.08
C1RP00736 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.82■■□□□ 1.08
C1RP00736 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
C1RP00736 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.82■■□□□ 1.08
C1RP00736 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
C1RP00736 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.82■■□□□ 1.08
C1RP00736 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.82■■□□□ 1.08
C1RP00736 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
C1RP00736 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.81■■□□□ 1.08
C1RP00736 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 MIR718-201ENST00000390190 70 ntBASIC21.81■■□□□ 1.08
C1RP00736 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 AL596275.1-201ENST00000423464 877 ntBASIC21.81■■□□□ 1.08
C1RP00736 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.81■■□□□ 1.08
C1RP00736 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 AC105020.6-201ENST00000621523 1217 ntBASIC21.81■■□□□ 1.08
C1RP00736 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
C1RP00736 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C1RP00736 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.8■■□□□ 1.08
C1RP00736 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C1RP00736 AL117328.2-201ENST00000624617 1940 ntBASIC21.8■■□□□ 1.08
C1RP00736 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
C1RP00736 FAM99A-202ENST00000538190 1989 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms