Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 AC245052.3-201ENST00000450182 901 ntBASIC21.18■□□□□ 0.98
MT-CO1P00395 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 AC016405.3-201ENST00000607710 860 ntBASIC21.18■□□□□ 0.98
MT-CO1P00395 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
MT-CO1P00395 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
MT-CO1P00395 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MT-CO1P00395 Z98882.1-201ENST00000622160 2253 ntBASIC21.18■□□□□ 0.98
MT-CO1P00395 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.18■□□□□ 0.98
MT-CO1P00395 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.18■□□□□ 0.98
MT-CO1P00395 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MT-CO1P00395 TSPY6P-201ENST00000448518 926 ntBASIC21.17■□□□□ 0.98
MT-CO1P00395 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 AF201337.1-201ENST00000520239 748 ntBASIC21.17■□□□□ 0.98
MT-CO1P00395 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 AC105036.2-201ENST00000569468 176 ntBASIC21.17■□□□□ 0.98
MT-CO1P00395 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.17■□□□□ 0.98
MT-CO1P00395 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
MT-CO1P00395 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MT-CO1P00395 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.17■□□□□ 0.98
MT-CO1P00395 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MT-CO1P00395 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-CO1P00395 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.16■□□□□ 0.98
MT-CO1P00395 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MT-CO1P00395 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.16■□□□□ 0.98
MT-CO1P00395 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 AC026310.3-201ENST00000625186 2373 ntBASIC21.16■□□□□ 0.98
MT-CO1P00395 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.16■□□□□ 0.98
MT-CO1P00395 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.16■□□□□ 0.98
MT-CO1P00395 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-CO1P00395 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
MT-CO1P00395 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MT-CO1P00395 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MT-CO1P00395 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MT-CO1P00395 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.15■□□□□ 0.98
MT-CO1P00395 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MT-CO1P00395 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.15■□□□□ 0.98
MT-CO1P00395 AC093787.1-201ENST00000450396 207 ntBASIC21.15■□□□□ 0.98
MT-CO1P00395 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.15■□□□□ 0.98
MT-CO1P00395 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.15■□□□□ 0.98
MT-CO1P00395 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MT-CO1P00395 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-CO1P00395 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
MT-CO1P00395 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-CO1P00395 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.14■□□□□ 0.98
MT-CO1P00395 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MT-CO1P00395 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.14■□□□□ 0.98
MT-CO1P00395 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.14■□□□□ 0.97
MT-CO1P00395 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.14■□□□□ 0.97
MT-CO1P00395 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MT-CO1P00395 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-CO1P00395 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.14■□□□□ 0.97
MT-CO1P00395 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.14■□□□□ 0.97
MT-CO1P00395 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.13■□□□□ 0.97
MT-CO1P00395 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.13■□□□□ 0.97
MT-CO1P00395 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-CO1P00395 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
MT-CO1P00395 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms