Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
TRUB2O95900 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.69■■□□□ 1.06
TRUB2O95900 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.69■■□□□ 1.06
TRUB2O95900 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 CNN2P6-201ENST00000439038 900 ntBASIC21.68■■□□□ 1.06
TRUB2O95900 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.68■■□□□ 1.06
TRUB2O95900 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 AC231657.2-201ENST00000624556 255 ntBASIC21.68■■□□□ 1.06
TRUB2O95900 AC013268.1-206ENST00000638368 961 ntBASIC21.68■■□□□ 1.06
TRUB2O95900 AC112229.1-201ENST00000639295 961 ntBASIC21.68■■□□□ 1.06
TRUB2O95900 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 AC121338.2-201ENST00000622535 1744 ntBASIC21.68■■□□□ 1.06
TRUB2O95900 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.68■■□□□ 1.06
TRUB2O95900 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRUB2O95900 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRUB2O95900 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRUB2O95900 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.67■■□□□ 1.06
TRUB2O95900 RAP2CP1-201ENST00000605103 478 ntBASIC21.67■■□□□ 1.06
TRUB2O95900 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRUB2O95900 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.66■■□□□ 1.06
TRUB2O95900 AC006128.1-201ENST00000624704 1661 ntBASIC21.66■■□□□ 1.06
TRUB2O95900 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRUB2O95900 PKD1P6-201ENST00000343738 4769 ntBASIC21.66■■□□□ 1.06
TRUB2O95900 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.66■■□□□ 1.06
TRUB2O95900 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.66■■□□□ 1.06
TRUB2O95900 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRUB2O95900 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.66■■□□□ 1.06
TRUB2O95900 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRUB2O95900 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TRUB2O95900 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRUB2O95900 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 AC007322.1-201ENST00000426983 750 ntBASIC21.65■■□□□ 1.06
TRUB2O95900 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 AC026185.1-201ENST00000445748 174 ntBASIC21.65■■□□□ 1.06
TRUB2O95900 AC007322.4-201ENST00000509611 723 ntBASIC21.65■■□□□ 1.06
TRUB2O95900 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.65■■□□□ 1.06
TRUB2O95900 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.65■■□□□ 1.06
TRUB2O95900 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRUB2O95900 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRUB2O95900 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
TRUB2O95900 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
TRUB2O95900 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRUB2O95900 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.64■■□□□ 1.06
TRUB2O95900 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.64■■□□□ 1.06
TRUB2O95900 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRUB2O95900 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TRUB2O95900 AC091799.1-201ENST00000422823 811 ntBASIC21.64■■□□□ 1.05
TRUB2O95900 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.64■■□□□ 1.05
TRUB2O95900 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.64■■□□□ 1.05
TRUB2O95900 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.64■■□□□ 1.05
TRUB2O95900 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.64■■□□□ 1.05
TRUB2O95900 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRUB2O95900 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
TRUB2O95900 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRUB2O95900 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms