Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CPNE6O95741 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.28■□□□□ 0.84
CPNE6O95741 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.28■□□□□ 0.84
CPNE6O95741 AC098934.4-201ENST00000564127 592 ntBASIC20.28■□□□□ 0.84
CPNE6O95741 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 AC016405.3-201ENST00000607710 860 ntBASIC20.28■□□□□ 0.84
CPNE6O95741 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.28■□□□□ 0.84
CPNE6O95741 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE6O95741 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE6O95741 RBM17P2-201ENST00000616397 1405 ntBASIC20.27■□□□□ 0.84
CPNE6O95741 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPNE6O95741 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CPNE6O95741 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 AC005229.4-201ENST00000610085 2198 ntBASIC20.27■□□□□ 0.84
CPNE6O95741 AC003102.1-202ENST00000563394 1796 ntBASIC20.27■□□□□ 0.84
CPNE6O95741 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 AL162412.1-201ENST00000567129 965 ntBASIC20.27■□□□□ 0.84
CPNE6O95741 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE6O95741 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE6O95741 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.27■□□□□ 0.84
CPNE6O95741 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE6O95741 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE6O95741 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE6O95741 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE6O95741 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE6O95741 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE6O95741 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.26■□□□□ 0.83
CPNE6O95741 AC093787.1-201ENST00000450396 207 ntBASIC20.26■□□□□ 0.83
CPNE6O95741 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE6O95741 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.26■□□□□ 0.83
CPNE6O95741 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.26■□□□□ 0.83
CPNE6O95741 AL591742.1-201ENST00000604433 565 ntBASIC20.26■□□□□ 0.83
CPNE6O95741 AC243732.1-201ENST00000612648 864 ntBASIC20.26■□□□□ 0.83
CPNE6O95741 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPNE6O95741 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CPNE6O95741 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CPNE6O95741 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE6O95741 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
CPNE6O95741 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE6O95741 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 AC092118.2-201ENST00000613495 667 ntBASIC20.25■□□□□ 0.83
CPNE6O95741 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.25■□□□□ 0.83
CPNE6O95741 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE6O95741 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
CPNE6O95741 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE6O95741 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CPNE6O95741 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CPNE6O95741 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.24■□□□□ 0.83
CPNE6O95741 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.24■□□□□ 0.83
CPNE6O95741 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPNE6O95741 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE6O95741 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE6O95741 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE6O95741 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE6O95741 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms