Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX2-2O95096 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-2O95096 MIR935-201ENST00000401179 91 ntBASIC19.11■□□□□ 0.65
NKX2-2O95096 AC016769.1-201ENST00000409132 1010 ntBASIC19.11■□□□□ 0.65
NKX2-2O95096 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 TERF1P5-201ENST00000477545 1207 ntBASIC19.11■□□□□ 0.65
NKX2-2O95096 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-2O95096 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.11■□□□□ 0.65
NKX2-2O95096 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NKX2-2O95096 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.11■□□□□ 0.65
NKX2-2O95096 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-2O95096 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NKX2-2O95096 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-2O95096 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.1■□□□□ 0.65
NKX2-2O95096 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-2O95096 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-2O95096 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-2O95096 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-2O95096 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NKX2-2O95096 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-2O95096 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-2O95096 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NKX2-2O95096 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.09■□□□□ 0.65
NKX2-2O95096 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-2O95096 MFSD11-216ENST00000590393 1141 ntBASIC19.09■□□□□ 0.65
NKX2-2O95096 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-2O95096 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-2O95096 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 AC007225.1-201ENST00000566331 1836 ntBASIC19.09■□□□□ 0.65
NKX2-2O95096 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 AC027702.1-201ENST00000563810 1770 ntBASIC19.09■□□□□ 0.65
NKX2-2O95096 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-2O95096 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-2O95096 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NKX2-2O95096 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX2-2O95096 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NKX2-2O95096 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX2-2O95096 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.08■□□□□ 0.64
NKX2-2O95096 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.08■□□□□ 0.64
NKX2-2O95096 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NKX2-2O95096 AC007322.3-201ENST00000426526 701 ntBASIC19.08■□□□□ 0.64
NKX2-2O95096 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NKX2-2O95096 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-2O95096 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX2-2O95096 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX2-2O95096 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 AC007322.4-201ENST00000509611 723 ntBASIC19.07■□□□□ 0.64
NKX2-2O95096 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
NKX2-2O95096 AC022517.1-201ENST00000592429 346 ntBASIC19.07■□□□□ 0.64
NKX2-2O95096 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.07■□□□□ 0.64
NKX2-2O95096 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NKX2-2O95096 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-2O95096 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms