Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.79■■□□□ 1.08
BEST1O76090 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
BEST1O76090 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.79■■□□□ 1.08
BEST1O76090 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.79■■□□□ 1.08
BEST1O76090 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
BEST1O76090 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.79■■□□□ 1.08
BEST1O76090 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.79■■□□□ 1.08
BEST1O76090 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BEST1O76090 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BEST1O76090 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BEST1O76090 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.79■■□□□ 1.08
BEST1O76090 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BEST1O76090 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.79■■□□□ 1.08
BEST1O76090 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BEST1O76090 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BEST1O76090 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BEST1O76090 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.78■■□□□ 1.08
BEST1O76090 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.78■■□□□ 1.08
BEST1O76090 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.78■■□□□ 1.08
BEST1O76090 AC142086.2-201ENST00000569753 217 ntBASIC21.78■■□□□ 1.08
BEST1O76090 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.78■■□□□ 1.08
BEST1O76090 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
BEST1O76090 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BEST1O76090 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BEST1O76090 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
BEST1O76090 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BEST1O76090 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BEST1O76090 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.77■■□□□ 1.08
BEST1O76090 SLC29A4P1-201ENST00000398760 971 ntBASIC21.77■■□□□ 1.08
BEST1O76090 MIPEPP3-201ENST00000412105 444 ntBASIC21.77■■□□□ 1.08
BEST1O76090 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.77■■□□□ 1.08
BEST1O76090 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.77■■□□□ 1.08
BEST1O76090 AC098934.4-201ENST00000564127 592 ntBASIC21.77■■□□□ 1.08
BEST1O76090 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.77■■□□□ 1.08
BEST1O76090 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.77■■□□□ 1.08
BEST1O76090 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BEST1O76090 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BEST1O76090 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BEST1O76090 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 AL355472.2-201ENST00000422958 438 ntBASIC21.76■■□□□ 1.07
BEST1O76090 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST1O76090 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.76■■□□□ 1.07
BEST1O76090 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST1O76090 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BEST1O76090 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
BEST1O76090 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.75■■□□□ 1.07
BEST1O76090 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
BEST1O76090 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BEST1O76090 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.75■■□□□ 1.07
BEST1O76090 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BEST1O76090 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST1O76090 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST1O76090 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.74■■□□□ 1.07
BEST1O76090 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.74■■□□□ 1.07
BEST1O76090 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
BEST1O76090 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
BEST1O76090 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
BEST1O76090 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST1O76090 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BEST1O76090 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
BEST1O76090 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BEST1O76090 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST1O76090 BX276092.2-201ENST00000417668 665 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms