Protein–RNA interactions for Protein: O75865

TRAPPC6A, Trafficking protein particle complex subunit 6A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6AO75865 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 RARRES2P4-201ENST00000514074 484 ntBASIC18.82■□□□□ 0.6
TRAPPC6AO75865 AL138781.1-201ENST00000566567 1274 ntBASIC18.82■□□□□ 0.6
TRAPPC6AO75865 AL162412.1-201ENST00000567129 965 ntBASIC18.82■□□□□ 0.6
TRAPPC6AO75865 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAPPC6AO75865 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 GUSBP6-202ENST00000438529 1198 ntBASIC18.81■□□□□ 0.6
TRAPPC6AO75865 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAPPC6AO75865 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 AL512625.2-201ENST00000417533 625 ntBASIC18.8■□□□□ 0.6
TRAPPC6AO75865 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAPPC6AO75865 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
TRAPPC6AO75865 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 MIPEPP3-201ENST00000412105 444 ntBASIC18.78■□□□□ 0.6
TRAPPC6AO75865 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAPPC6AO75865 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 BX276092.2-201ENST00000417668 665 ntBASIC18.77■□□□□ 0.6
TRAPPC6AO75865 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 AC007322.3-201ENST00000426526 701 ntBASIC18.77■□□□□ 0.6
TRAPPC6AO75865 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAPPC6AO75865 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms