Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC104187.1-201ENST00000607510 612 ntBASIC20.66■□□□□ 0.9
GPC4O75487 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GPC4O75487 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GPC4O75487 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GPC4O75487 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.66■□□□□ 0.9
GPC4O75487 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.66■□□□□ 0.9
GPC4O75487 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.66■□□□□ 0.9
GPC4O75487 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
GPC4O75487 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GPC4O75487 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GPC4O75487 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GPC4O75487 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
GPC4O75487 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
GPC4O75487 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.65■□□□□ 0.9
GPC4O75487 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.65■□□□□ 0.9
GPC4O75487 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.65■□□□□ 0.9
GPC4O75487 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.65■□□□□ 0.9
GPC4O75487 NTF6G-201ENST00000591094 616 ntBASIC20.65■□□□□ 0.9
GPC4O75487 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.65■□□□□ 0.9
GPC4O75487 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GPC4O75487 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.65■□□□□ 0.9
GPC4O75487 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
GPC4O75487 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.65■□□□□ 0.9
GPC4O75487 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GPC4O75487 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.64■□□□□ 0.9
GPC4O75487 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GPC4O75487 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GPC4O75487 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
GPC4O75487 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GPC4O75487 MIR935-201ENST00000401179 91 ntBASIC20.64■□□□□ 0.89
GPC4O75487 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GPC4O75487 AC010141.2-201ENST00000452426 721 ntBASIC20.64■□□□□ 0.89
GPC4O75487 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GPC4O75487 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GPC4O75487 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 AL157384.1-201ENST00000445995 2473 ntBASIC20.63■□□□□ 0.89
GPC4O75487 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
GPC4O75487 MIR5787-201ENST00000611784 55 ntBASIC20.63■□□□□ 0.89
GPC4O75487 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
GPC4O75487 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
GPC4O75487 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC4O75487 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.63■□□□□ 0.89
GPC4O75487 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.63■□□□□ 0.89
GPC4O75487 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GPC4O75487 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 KRT18P5-201ENST00000436075 1291 ntBASIC20.62■□□□□ 0.89
GPC4O75487 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.62■□□□□ 0.89
GPC4O75487 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.62■□□□□ 0.89
GPC4O75487 AP001160.3-201ENST00000601484 763 ntBASIC20.62■□□□□ 0.89
GPC4O75487 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
GPC4O75487 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.62■□□□□ 0.89
GPC4O75487 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
GPC4O75487 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GPC4O75487 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.62■□□□□ 0.89
GPC4O75487 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.61■□□□□ 0.89
GPC4O75487 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GPC4O75487 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GPC4O75487 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.61■□□□□ 0.89
GPC4O75487 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
GPC4O75487 KRT19P1-201ENST00000405746 1186 ntBASIC20.61■□□□□ 0.89
GPC4O75487 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.61■□□□□ 0.89
GPC4O75487 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GPC4O75487 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
GPC4O75487 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
GPC4O75487 LINC01521-201ENST00000504184 1943 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms