Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
USH2AO75445 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 AL121749.1-202ENST00000609313 2153 ntBASIC9.35□□□□□ -0.91
USH2AO75445 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 GGT1-206ENST00000404223 952 ntTSL 2 BASIC9.35□□□□□ -0.91
USH2AO75445 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC9.35□□□□□ -0.91
USH2AO75445 AC105020.6-201ENST00000621523 1217 ntBASIC9.35□□□□□ -0.91
USH2AO75445 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.35□□□□□ -0.91
USH2AO75445 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC9.35□□□□□ -0.91
USH2AO75445 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC9.35□□□□□ -0.91
USH2AO75445 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
USH2AO75445 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.35□□□□□ -0.91
USH2AO75445 AL390955.1-201ENST00000428694 934 ntBASIC9.35□□□□□ -0.91
USH2AO75445 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
USH2AO75445 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
USH2AO75445 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC9.34□□□□□ -0.91
USH2AO75445 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC9.34□□□□□ -0.91
USH2AO75445 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 ABCB10P4-201ENST00000566803 2184 ntBASIC9.34□□□□□ -0.91
USH2AO75445 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC9.34□□□□□ -0.91
USH2AO75445 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC9.34□□□□□ -0.91
USH2AO75445 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC9.34□□□□□ -0.91
USH2AO75445 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
USH2AO75445 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC9.34□□□□□ -0.91
USH2AO75445 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC9.34□□□□□ -0.91
USH2AO75445 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
USH2AO75445 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
USH2AO75445 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC9.34□□□□□ -0.91
USH2AO75445 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC9.34□□□□□ -0.91
USH2AO75445 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 FAM8A6P-201ENST00000407496 1135 ntBASIC9.34□□□□□ -0.91
USH2AO75445 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
USH2AO75445 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC9.33□□□□□ -0.92
USH2AO75445 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
USH2AO75445 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC9.33□□□□□ -0.92
USH2AO75445 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.33□□□□□ -0.92
USH2AO75445 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC9.33□□□□□ -0.92
USH2AO75445 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 PP7080-204ENST00000510714 601 ntTSL 3 BASIC9.33□□□□□ -0.92
USH2AO75445 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 UNC93B2-201ENST00000285383 730 ntBASIC9.33□□□□□ -0.92
USH2AO75445 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 INGX-201ENST00000359239 846 ntBASIC9.33□□□□□ -0.92
USH2AO75445 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC9.33□□□□□ -0.92
USH2AO75445 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 AC139887.4-201ENST00000607877 719 ntBASIC9.33□□□□□ -0.92
USH2AO75445 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
USH2AO75445 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
USH2AO75445 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
USH2AO75445 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
USH2AO75445 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms