Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF11O60813 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF11O60813 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 AC090192.1-201ENST00000517740 490 ntBASIC21.04■□□□□ 0.96
PRAMEF11O60813 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 AL050303.2-201ENST00000619798 666 ntBASIC21.04■□□□□ 0.96
PRAMEF11O60813 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF11O60813 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF11O60813 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRAMEF11O60813 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
PRAMEF11O60813 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF11O60813 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF11O60813 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF11O60813 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF11O60813 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRAMEF11O60813 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
PRAMEF11O60813 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 RARRES2P4-201ENST00000514074 484 ntBASIC21.02■□□□□ 0.96
PRAMEF11O60813 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 PLK5-205ENST00000642079 1969 ntBASIC21.02■□□□□ 0.96
PRAMEF11O60813 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF11O60813 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
PRAMEF11O60813 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
PRAMEF11O60813 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 AC069236.1-201ENST00000604339 616 ntBASIC21.01■□□□□ 0.95
PRAMEF11O60813 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF11O60813 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF11O60813 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF11O60813 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF11O60813 AC006970.2-201ENST00000450065 779 ntBASIC21■□□□□ 0.95
PRAMEF11O60813 PPP1R14BP3-201ENST00000509033 445 ntBASIC21■□□□□ 0.95
PRAMEF11O60813 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21■□□□□ 0.95
PRAMEF11O60813 AC133552.2-202ENST00000575694 574 ntBASIC21■□□□□ 0.95
PRAMEF11O60813 OR10C1-204ENST00000622521 1039 ntBASIC21■□□□□ 0.95
PRAMEF11O60813 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF11O60813 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF11O60813 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF11O60813 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF11O60813 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF11O60813 AC008694.1-202ENST00000636953 945 ntBASIC20.99■□□□□ 0.95
PRAMEF11O60813 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF11O60813 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF11O60813 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms