Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC28A2O43868 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLC28A2O43868 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC28A2O43868 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC28A2O43868 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLC28A2O43868 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC28A2O43868 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC28A2O43868 UBE2DNL-204ENST00000602536 740 ntBASIC19.87■□□□□ 0.77
SLC28A2O43868 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC28A2O43868 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC28A2O43868 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC28A2O43868 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC28A2O43868 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC28A2O43868 RARRES2P4-201ENST00000514074 484 ntBASIC19.86■□□□□ 0.77
SLC28A2O43868 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SLC28A2O43868 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 AC133552.2-202ENST00000575694 574 ntBASIC19.86■□□□□ 0.77
SLC28A2O43868 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC28A2O43868 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC28A2O43868 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC28A2O43868 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC28A2O43868 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC28A2O43868 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SLC28A2O43868 FEM1AP4-201ENST00000443167 1987 ntBASIC19.85■□□□□ 0.77
SLC28A2O43868 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 AC142381.4-202ENST00000563973 229 ntBASIC19.85■□□□□ 0.77
SLC28A2O43868 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC28A2O43868 AC104187.1-201ENST00000607510 612 ntBASIC19.85■□□□□ 0.77
SLC28A2O43868 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC28A2O43868 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC28A2O43868 AF106564.1-201ENST00000607058 2553 ntBASIC19.85■□□□□ 0.77
SLC28A2O43868 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC28A2O43868 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC28A2O43868 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC28A2O43868 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC28A2O43868 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SLC28A2O43868 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SLC28A2O43868 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC28A2O43868 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC28A2O43868 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC28A2O43868 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC28A2O43868 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.83■□□□□ 0.76
SLC28A2O43868 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC28A2O43868 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SLC28A2O43868 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SLC28A2O43868 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SLC28A2O43868 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SLC28A2O43868 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.82■□□□□ 0.76
SLC28A2O43868 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC28A2O43868 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC28A2O43868 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC28A2O43868 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms