Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YJEFN3A6XGL0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 ID1-201ENST00000376105 1233 ntBASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 HLA-L-209ENST00000420110 1011 ntBASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 AF201337.1-201ENST00000520239 748 ntBASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 AC105036.2-201ENST00000569468 176 ntBASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YJEFN3A6XGL0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 AL137060.1-201ENST00000618151 2648 ntBASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 GPX1P1-201ENST00000388829 606 ntBASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
YJEFN3A6XGL0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 GUSBP6-202ENST00000438529 1198 ntBASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 AC104771.1-201ENST00000603335 964 ntBASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YJEFN3A6XGL0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 AC011484.1-201ENST00000377652 1995 ntBASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 TSPY6P-201ENST00000448518 926 ntBASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 AL109923.1-201ENST00000618799 583 ntBASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
YJEFN3A6XGL0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 AL512625.2-201ENST00000417533 625 ntBASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.59■■□□□ 1.05
YJEFN3A6XGL0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.58■■□□□ 1.05
YJEFN3A6XGL0 AC121338.2-201ENST00000622535 1744 ntBASIC21.58■■□□□ 1.04
YJEFN3A6XGL0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 AC010980.2-201ENST00000587099 1412 ntBASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 PLK5-205ENST00000642079 1969 ntBASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
YJEFN3A6XGL0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms