Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 AC091799.1-201ENST00000422823 811 ntBASIC16.09■□□□□ 0.17
FAM223BA6NKX1 AC007322.4-201ENST00000509611 723 ntBASIC16.09■□□□□ 0.17
FAM223BA6NKX1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 MFSD11-216ENST00000590393 1141 ntBASIC16.09■□□□□ 0.17
FAM223BA6NKX1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM223BA6NKX1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
FAM223BA6NKX1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 AC007322.3-201ENST00000426526 701 ntBASIC16.08■□□□□ 0.16
FAM223BA6NKX1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 AL162412.1-201ENST00000567129 965 ntBASIC16.08■□□□□ 0.16
FAM223BA6NKX1 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FAM223BA6NKX1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 AL591742.1-201ENST00000604433 565 ntBASIC16.07■□□□□ 0.16
FAM223BA6NKX1 AL137784.2-201ENST00000607332 1000 ntBASIC16.07■□□□□ 0.16
FAM223BA6NKX1 AC011767.1-201ENST00000617410 1153 ntBASIC16.07■□□□□ 0.16
FAM223BA6NKX1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 AC006128.1-201ENST00000624704 1661 ntBASIC16.07■□□□□ 0.16
FAM223BA6NKX1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.07■□□□□ 0.16
FAM223BA6NKX1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.06■□□□□ 0.16
FAM223BA6NKX1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
FAM223BA6NKX1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FAM223BA6NKX1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms