Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRDV1A0A1B0GX56 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 TSPY9P-201ENST00000440215 945 ntBASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 TSPY11P-201ENST00000442607 1045 ntBASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 AC098818.2-201ENST00000564925 2320 ntBASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.18■□□□□ 0.5
TRDV1A0A1B0GX56 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 AP005435.1-201ENST00000529293 1178 ntBASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 AC011484.1-201ENST00000377652 1995 ntBASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.17■□□□□ 0.5
TRDV1A0A1B0GX56 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 BX005040.4-201ENST00000637145 1518 ntBASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRDV1A0A1B0GX56 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 AC092720.2-201ENST00000602388 1665 ntBASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRDV1A0A1B0GX56 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRDV1A0A1B0GX56 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms