Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC091799.1-201ENST00000422823 811 ntBASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 GUSBP6-202ENST00000438529 1198 ntBASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 CDV3P1-201ENST00000471403 739 ntBASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 AL162412.1-201ENST00000567129 965 ntBASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 MKRN4P-201ENST00000444706 1521 ntBASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC093787.1-201ENST00000450396 207 ntBASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.94□□□□□ -0.02
IGHV4-28A0A0C4DH34 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 RARRES2P4-201ENST00000514074 484 ntBASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGHV4-28A0A0C4DH34 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 AL138781.1-201ENST00000566567 1274 ntBASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGHV4-28A0A0C4DH34 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 AL512625.2-201ENST00000417533 625 ntBASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC142086.2-201ENST00000569753 217 ntBASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms