Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KRT18P5-201ENST00000436075 1291 ntBASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KRT18P61-201ENST00000585825 1298 ntBASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MYCNOS-205ENST00000641950 531 ntBASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC116050.2-201ENST00000612102 1779 ntBASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RBM17P2-201ENST00000616397 1405 ntBASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PLK5-205ENST00000642079 1969 ntBASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC137761.2-201ENST00000561729 223 ntBASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC145350.3-201ENST00000569033 163 ntBASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AC016769.1-201ENST00000409132 1010 ntBASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV7-1A0A0A6YYK4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV7-1A0A0A6YYK4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-1A0A0A6YYK4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-1A0A0A6YYK4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV7-1A0A0A6YYK4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms