Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC006970.2-201ENST00000450065 779 ntBASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 DUX4L16-201ENST00000555130 1264 ntBASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC010536.3-201ENST00000620306 533 ntBASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MIR663A-201ENST00000385250 93 ntBASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TERF1P5-201ENST00000477545 1207 ntBASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC091799.1-201ENST00000422823 811 ntBASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC231657.2-201ENST00000624556 255 ntBASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 NCF1B-203ENST00000435988 1254 ntBASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFSF12-TNFSF13A0A0A6YY99 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms