Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL158175.1-202ENST00000635173 1194 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC139700.1-201ENST00000605810 1540 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 DNAH7-203ENST00000410072 1937 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 GLDCP1-201ENST00000510885 2678 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 SSBP2-219ENST00000515395 1398 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 ZSCAN30-205ENST00000589178 3368 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 SLC7A7-215ENST00000555702 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC239799.2-201ENST00000622359 2002 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 VPS50-201ENST00000251739 1193 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 TSACC-204ENST00000368254 598 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 HLA-DRA-201ENST00000374982 1169 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AL358473.2-202ENST00000415359 508 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 LDAH-206ENST00000419825 826 ntTSL 3 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 DDX11L5-201ENST00000421620 654 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 KRTAP8-3P-201ENST00000423658 188 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 VDAC1P12-201ENST00000451853 882 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 SNRPCP10-201ENST00000481033 210 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 SOX2-OT-215ENST00000493521 1239 ntTSL 3 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC024022.1-201ENST00000503321 598 ntTSL 3 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 PRELID1P4-201ENST00000561466 512 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC008915.1-201ENST00000561624 837 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC032019.1-201ENST00000579100 173 ntTSL 3 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC135178.5-201ENST00000602597 674 ntBASIC8.87□□□□□ -0.99
SNX18Q96RF0 FGA-203ENST00000622532 1130 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 ARL17B-208ENST00000622877 565 ntTSL 4 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 DANCR-205ENST00000623036 748 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 SOX2-OT-244ENST00000627738 692 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AC027369.1-201ENST00000640698 1105 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 RPLP0P2-206ENST00000496593 3525 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 GALNTL6-203ENST00000506823 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 SULT1C2P1-201ENST00000427208 1875 ntTSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 C8orf86-201ENST00000358138 2250 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 MARCH10-203ENST00000544856 3338 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SNX18Q96RF0 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SNX18Q96RF0 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 STARD6-203ENST00000581310 1371 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 BPNT1-210ENST00000544404 2379 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 CEP57-202ENST00000325542 3178 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 SLC25A52-201ENST00000269205 1319 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC007238.1-201ENST00000434096 1741 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PRB4-201ENST00000279575 916 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AF241726.1-201ENST00000317902 699 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 CA5BP1-204ENST00000380336 843 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AP000344.1-203ENST00000426024 163 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC098820.1-202ENST00000438978 750 ntTSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PGM5P4-AS1-203ENST00000446595 739 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms