Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 RN7SL731P-201ENST00000584329 293 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 FLT3LG-203ENST00000594009 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AC010359.1-201ENST00000602982 507 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 ELOCP33-201ENST00000603716 632 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 MZT1P1-201ENST00000603781 246 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 STPG3-205ENST00000620243 1025 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 SLTM-226ENST00000628684 1040 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AL355377.2-201ENST00000623595 1751 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 FLJ40194-201ENST00000322227 2317 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 SYT11-201ENST00000368324 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 ODF2L-213ENST00000478286 1650 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 NDUFAF5-202ENST00000378106 5529 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 Z93929.2-201ENST00000615011 2623 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 ZAN-204ENST00000546292 8378 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 BPNT1-210ENST00000544404 2379 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 MTO1-205ENST00000415954 2837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 LINC00608-201ENST00000419101 2254 ntTSL 5 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 P2RY10-201ENST00000171757 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 HSD17B7-202ENST00000367913 666 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AL136968.1-201ENST00000403053 946 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AL009172.1-201ENST00000436365 1098 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC108488.1-205ENST00000438482 914 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AP000350.3-201ENST00000440099 289 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ID2-AS1-207ENST00000455965 794 ntTSL 4 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC006978.1-201ENST00000496846 1234 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CACNA1C-AS2-201ENST00000545526 609 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AL133167.1-201ENST00000554889 806 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ASB9P1-201ENST00000557146 793 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC107241.1-201ENST00000560280 434 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 RN7SL45P-201ENST00000578050 298 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC024267.6-202ENST00000579187 1103 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 TRMT112P7-201ENST00000603133 367 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AC005618.1-202ENST00000606674 544 ntTSL 4 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CYP19A1-204ENST00000405913 1697 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CCDC144CP-202ENST00000433419 5227 ntBASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 HDAC9-210ENST00000428307 2359 ntTSL 2 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 TNIK-214ENST00000488470 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 KIF23-207ENST00000559279 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 PRRG3-201ENST00000370353 5977 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 CD274-201ENST00000381573 3343 ntTSL 5 BASIC10.17□□□□□ -0.78
SYCE2Q6PIF2 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 BCL6B-201ENST00000293805 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AP000894.2-201ENST00000581719 3902 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 MAP3K9-202ENST00000553414 3544 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 TRAF3IP2-201ENST00000340026 2785 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 HNRNPKP1-201ENST00000510896 1379 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 LIMCH1-205ENST00000503057 5467 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SLC7A8-201ENST00000316902 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 SRGAP2-215ENST00000605610 3212 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 LINC00211-201ENST00000413792 1923 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AL109615.1-201ENST00000331979 455 ntBASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 FANCL-204ENST00000403676 849 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC10.16□□□□□ -0.78
SYCE2Q6PIF2 AL096701.1-201ENST00000445477 457 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms