Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Metazoa_SRP.121-201ENST00000578843 303 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC004080.4-201ENST00000602610 633 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AL596092.1-201ENST00000605701 304 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AL158077.1-201ENST00000616744 174 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 RN7SL627P-201ENST00000620534 303 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC244636.2-201ENST00000448031 1669 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 CCT6P4-201ENST00000430443 1589 ntBASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 TMPRSS13-207ENST00000528626 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 ZNF75BP-201ENST00000546499 1524 ntBASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 CPEB1-215ENST00000617958 2776 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
NPIPA3F8WFD2 ZNF547-201ENST00000282282 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 HARS-208ENST00000504366 3494 ntTSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 EDA-213ENST00000616899 4643 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ZNF662-204ENST00000440367 4099 ntTSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC073065.1-201ENST00000411678 2866 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC104394.1-201ENST00000611658 1748 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 RN7SKP79-201ENST00000363373 336 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 IGLV2-18-201ENST00000390310 367 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC108059.1-201ENST00000411629 725 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 PPP1R12BP2-201ENST00000416956 639 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 RN7SL484P-201ENST00000462651 202 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 SNRPCP16-201ENST00000506029 210 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AF250324.1-202ENST00000511785 979 ntTSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 IGHV7-27-201ENST00000522512 330 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC022762.1-201ENST00000529961 816 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC020611.1-201ENST00000537101 254 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ATP5J2P5-201ENST00000537967 258 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AL161725.1-212ENST00000585819 745 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 Metazoa_SRP.110-201ENST00000611670 282 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AL117335.1-201ENST00000620919 678 ntTSL 3 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC027575.4-201ENST00000622010 586 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AL031291.1-201ENST00000641979 742 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 CD3G-206ENST00000532917 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AGK-203ENST00000473247 1550 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 AC006946.2-201ENST00000608373 2855 ntBASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ZNF215-201ENST00000278319 3448 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
NPIPA3F8WFD2 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 PPP1R12BP1-201ENST00000367272 1671 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 TRPC2-201ENST00000451043 3173 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 AC008534.1-201ENST00000513849 1940 ntTSL 5 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 AP001425.1-201ENST00000632732 1940 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 SP100-201ENST00000264052 3882 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 RPL5P31-201ENST00000399168 635 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 PRDX3P1-201ENST00000418695 763 ntBASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
NPIPA3F8WFD2 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms