Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PPM1N-202ENST00000396736 527 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 Z84484.1-201ENST00000411643 319 ntTSL 3 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RFFL-203ENST00000413582 1217 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AL354892.1-201ENST00000430250 335 ntTSL 3 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 FERP1-201ENST00000436391 793 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC141930.1-201ENST00000438247 786 ntTSL 4 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC092634.3-201ENST00000450544 637 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AL121748.2-201ENST00000451530 781 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RN7SL231P-201ENST00000461840 272 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RN7SL108P-201ENST00000481903 297 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AK4P2-201ENST00000504372 670 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC106872.7-201ENST00000508621 312 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 VENTXP6-201ENST00000521543 314 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RPS3-219ENST00000534440 564 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC078950.1-202ENST00000542062 562 ntTSL 4 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AC025161.1-201ENST00000552481 591 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AL353649.1-201ENST00000625060 619 ntBASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 LINC00595-209ENST00000634389 549 ntTSL 4 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ZMIZ2-203ENST00000413916 3773 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 MTUS2-AS1-201ENST00000323380 1992 ntTSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 KRBA2-201ENST00000331336 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 MAP3K9-202ENST00000553414 3544 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 M1AP-209ENST00000536235 2531 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 MAB21L3-201ENST00000369500 3229 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 BPNT1-210ENST00000544404 2379 ntTSL 2 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
NPIPA3F8WFD2 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 APOBEC3F-201ENST00000308521 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 IL7-202ENST00000379113 1888 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 LINC01514-201ENST00000434189 1338 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 CDH8-211ENST00000584337 3986 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 PPID-201ENST00000307720 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC011467.1-201ENST00000562262 3355 ntTSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 RNA5SP379-201ENST00000364599 113 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 SNORA77.1-201ENST00000408156 125 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 NPM1P32-201ENST00000412580 604 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 PGAM1P6-201ENST00000425684 747 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AL353150.1-202ENST00000429700 585 ntTSL 3 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC084851.3-201ENST00000432771 573 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ADI1P1-201ENST00000438914 538 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AP000290.1-201ENST00000450830 449 ntTSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 GAS5-224ENST00000454068 688 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 RN7SL169P-201ENST00000485643 289 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 UBE2HP1-201ENST00000517466 360 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 IGLV3-13-201ENST00000518475 223 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ENY2-208ENST00000520147 857 ntTSL 4 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 LINC02219-201ENST00000520762 454 ntTSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AP003031.1-201ENST00000534354 758 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AL358335.1-201ENST00000555388 1066 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC103739.2-201ENST00000559839 807 ntTSL 4 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC055876.4-201ENST00000562515 712 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 IGHV3OR16-15-201ENST00000565463 414 ntBASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC8.9□□□□□ -0.98
NPIPA3F8WFD2 AC015853.1-201ENST00000574008 592 ntTSL 3 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms