Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC024940.2-201ENST00000495623 606 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 AP004607.8-201ENST00000526848 323 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 AC130364.1-201ENST00000532682 795 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 AC027369.4-201ENST00000534243 816 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 TSFM-209ENST00000548851 794 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 FKBP1AP2-201ENST00000560953 283 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 MIR762HG-202ENST00000565573 1125 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 RN7SL405P-201ENST00000582502 289 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 RN7SL411P-201ENST00000585204 300 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 AL136084.3-201ENST00000605631 439 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 LINC00623-202ENST00000614062 830 ntTSL 5 BASIC10.15□□□□□ -0.78
SLC1A1P43005 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 COPS4-202ENST00000503682 1702 ntTSL 5 BASIC10.15□□□□□ -0.78
SLC1A1P43005 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
SLC1A1P43005 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC10.15□□□□□ -0.79
SLC1A1P43005 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SLC1A1P43005 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SLC1A1P43005 BNIPL-201ENST00000295294 2336 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
SLC1A1P43005 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
SLC1A1P43005 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SLC1A1P43005 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 C8orf86-201ENST00000358138 2250 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 AC073065.1-201ENST00000411678 2866 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 DNM1L-211ENST00000547312 2393 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 MYOF-203ENST00000371488 763 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 ST3GAL3-215ENST00000372367 644 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 TPM3P2-201ENST00000397772 723 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 CEACAM21-202ENST00000401445 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 PPIAP29-201ENST00000414949 499 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 RN7SL419P-201ENST00000471592 287 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 ZNF317P1-201ENST00000521453 1027 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 ST3GAL3-229ENST00000528371 599 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 AC005696.3-201ENST00000608984 303 ntTSL 3 BASIC10.14□□□□□ -0.79
SLC1A1P43005 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 AC092653.2-201ENST00000624373 513 ntBASIC10.14□□□□□ -0.79
SLC1A1P43005 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC10.14□□□□□ -0.79
SLC1A1P43005 BISPR-209ENST00000635176 1041 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 AC073869.5-201ENST00000635979 465 ntTSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 TAF1A-202ENST00000352967 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 RUNX1T1-215ENST00000518844 2453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 TTC39A-201ENST00000262675 2173 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
SLC1A1P43005 ERICH6-203ENST00000491361 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SLC1A1P43005 ZNF550-206ENST00000506609 1361 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SLC1A1P43005 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 NAMA-204ENST00000604258 2133 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 AC091825.1-201ENST00000622952 2621 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 AL365217.1-201ENST00000398578 2436 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 SNX12-201ENST00000276105 720 ntAPPRIS ALT1 TSL 3 BASIC10.13□□□□□ -0.79
SLC1A1P43005 OR52K2-201ENST00000325719 1067 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SLC1A1P43005 APOL4-201ENST00000328429 844 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 SYN3-201ENST00000332840 972 ntTSL 5 BASIC10.13□□□□□ -0.79
SLC1A1P43005 NME9-202ENST00000333911 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 MIR210-201ENST00000362168 110 ntBASIC10.13□□□□□ -0.79
SLC1A1P43005 HSD17B7-203ENST00000367915 507 ntTSL 2 BASIC10.13□□□□□ -0.79
SLC1A1P43005 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SLC1A1P43005 ZDHHC4P1-201ENST00000396712 1035 ntBASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms