Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC008555.4-201ENST00000605481 568 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 GPC5-204ENST00000618596 960 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC010335.2-201ENST00000623166 528 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AL031719.2-201ENST00000624488 476 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC132825.5-201ENST00000640603 310 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 ACSBG2-206ENST00000588485 2478 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 NF1P9-201ENST00000629326 2008 ntBASIC10.17□□□□□ -0.78
SLC1A1P43005 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 SGO1-206ENST00000421451 1969 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC10.17□□□□□ -0.78
SLC1A1P43005 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 CACNB4-231ENST00000636721 1542 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SLC1A1P43005 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SLC1A1P43005 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 LDHC-207ENST00000541669 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 NCALD-225ENST00000522951 1315 ntTSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 H3F3AP6-201ENST00000230495 411 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 H3F3AP4-201ENST00000369387 411 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 Z83839.1-201ENST00000423412 630 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 AC013474.1-201ENST00000440018 799 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 ST13P15-201ENST00000460666 1107 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 RN7SL334P-201ENST00000465067 279 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 AC078814.1-201ENST00000484568 645 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 COX17-203ENST00000484810 471 ntTSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 IL32-216ENST00000529699 672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 AC007342.2-201ENST00000568878 395 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 AC026461.3-201ENST00000569778 444 ntTSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 AL596092.1-201ENST00000605701 304 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 OR55B1P-202ENST00000641245 1276 ntBASIC10.16□□□□□ -0.78
SLC1A1P43005 PRAMEF17-201ENST00000376098 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 AL021937.1-201ENST00000420171 1558 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 RCBTB1-202ENST00000378302 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC10.16□□□□□ -0.78
SLC1A1P43005 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC10.16□□□□□ -0.78
SLC1A1P43005 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SLC1A1P43005 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 RGS6-219ENST00000622468 5453 ntTSL 5 BASIC10.15□□□□□ -0.78
SLC1A1P43005 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC10.15□□□□□ -0.78
SLC1A1P43005 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 PLSCR4-201ENST00000354952 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
SLC1A1P43005 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 COLEC10-201ENST00000332843 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
SLC1A1P43005 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC10.15□□□□□ -0.78
SLC1A1P43005 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 NINJ2-203ENST00000433832 945 ntTSL 2 BASIC10.15□□□□□ -0.78
SLC1A1P43005 ULBP3-202ENST00000438272 735 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SLC1A1P43005 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC10.15□□□□□ -0.78
SLC1A1P43005 AC245884.4-201ENST00000450173 472 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 PHBP12-201ENST00000453979 811 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 RN7SL361P-201ENST00000470785 298 ntBASIC10.15□□□□□ -0.78
SLC1A1P43005 AL033384.2-201ENST00000474641 456 ntTSL 3 BASIC10.15□□□□□ -0.78
SLC1A1P43005 RPS2P45-202ENST00000490535 847 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms