Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MICAL3-204ENST00000414725 4756 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ENTPD3-AS1-202ENST00000425156 2036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 SEMA4D-208ENST00000422704 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 C11orf57-203ENST00000420986 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AL035467.1-201ENST00000403583 686 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 H2AFZP1-201ENST00000416034 395 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AC011228.1-201ENST00000439027 757 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 RPL17P1-201ENST00000445304 536 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 TMEM97P1-201ENST00000452969 451 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AP000424.1-201ENST00000521851 558 ntTSL 4 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AC023034.2-201ENST00000559428 476 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 FRG2KP-202ENST00000568403 827 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 CLEC4M-209ENST00000596707 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AC018648.1-201ENST00000608314 668 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 AL603865.1-201ENST00000403062 1348 ntBASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 TTC23-201ENST00000262074 3316 ntTSL 5 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 MMP19-201ENST00000322569 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYCE2Q6PIF2 ZNF2-205ENST00000622059 1624 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AL031283.1-201ENST00000427824 5178 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 C10orf53-202ENST00000374112 2130 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 HDAC9-228ENST00000524023 2199 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC141257.1-202ENST00000570288 2239 ntTSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 LYSMD1-201ENST00000368908 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 KCNH5-203ENST00000394968 2490 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 TCF19-202ENST00000376257 3290 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 OR9A4-202ENST00000641559 2018 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 MIR219A1-201ENST00000362166 110 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 PADI1-201ENST00000375471 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 PRYP1-201ENST00000412474 445 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 PRYP2-201ENST00000416652 492 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 KIRREL1-IT1-201ENST00000419415 587 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC245884.4-201ENST00000450173 472 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 RPL3P3-201ENST00000467870 1213 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AP000867.1-201ENST00000511464 255 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 IGHVII-15-1-201ENST00000517931 220 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC108449.1-201ENST00000523661 457 ntTSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC090531.1-201ENST00000547168 923 ntTSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 CCL4L2-210ENST00000610565 785 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 SYN3-213ENST00000619146 561 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 FCRLA-208ENST00000367953 2066 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 AL133355.1-201ENST00000568017 2388 ntBASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SYCE2Q6PIF2 TRPV5-203ENST00000442623 2120 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms