Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RN7SL100P-201ENST00000460565 293 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL356235.1-202ENST00000506043 337 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC010307.2-201ENST00000509051 466 ntTSL 4 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZNF317P1-201ENST00000521453 1027 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AP003550.1-201ENST00000522416 414 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 HNRNPA3P10-201ENST00000547726 1138 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC012653.1-201ENST00000558410 931 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC073941.2-201ENST00000560476 433 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 ARL2BP-202ENST00000562023 547 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC040169.2-201ENST00000563242 1015 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 EHD4-AS1-201ENST00000564168 771 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 IGHV1OR16-4-201ENST00000566350 205 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL137796.1-201ENST00000608190 577 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 SLC2AXP1-201ENST00000612939 909 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 OR7G15P-201ENST00000617262 333 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AL596275.2-202ENST00000641180 956 ntBASIC9.02□□□□□ -0.97
SNX18Q96RF0 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 PDHA2-201ENST00000295266 1456 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 KIF2B-201ENST00000268919 2313 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 ZNF141-205ENST00000512994 1611 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SNX18Q96RF0 SLAMF7-204ENST00000441662 2497 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SNX18Q96RF0 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 IPO7P2-201ENST00000451446 1750 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 TNC-210ENST00000535648 7508 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 HP-201ENST00000228226 960 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 TPRKB-201ENST00000272424 748 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 OR10G6-201ENST00000307002 999 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 PTGR1-201ENST00000309195 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 FXYD5-204ENST00000392219 872 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 OR51N1P-201ENST00000433299 952 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC007563.1-201ENST00000434973 689 ntTSL 3 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AL591644.1-201ENST00000436102 764 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AL590483.2-201ENST00000440148 567 ntTSL 3 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 RUSC1-AS1-201ENST00000443642 679 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 ATP5J2LP-201ENST00000444161 235 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 GAPDHP74-201ENST00000449411 625 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC093789.1-201ENST00000494861 649 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 SNRPCP13-201ENST00000505417 190 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC008443.5-202ENST00000508877 392 ntTSL 3 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 OR4A44P-201ENST00000524504 948 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 PROSER3-206ENST00000536950 1266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 NENFP2-201ENST00000551462 440 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC109495.1-201ENST00000568026 551 ntTSL 4 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC002551.1-201ENST00000569881 592 ntTSL 3 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC005323.1-202ENST00000581947 578 ntTSL 4 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC036176.2-201ENST00000589763 1153 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AP000919.4-201ENST00000608032 720 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 CSH1-206ENST00000610991 580 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 Metazoa_SRP.114-201ENST00000618435 279 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 IGHV3-54-201ENST00000622166 353 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 AC092745.3-201ENST00000622868 216 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 CYP4F9P-201ENST00000589847 1339 ntBASIC9.01□□□□□ -0.97
SNX18Q96RF0 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SNX18Q96RF0 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
SNX18Q96RF0 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms