Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CYP46A1Q9Y6A2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CYP46A1Q9Y6A2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CYP46A1Q9Y6A2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
CYP46A1Q9Y6A2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.58■■□□□ 1.52
CYP46A1Q9Y6A2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 RARRES2P11-201ENST00000635158 484 ntBASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CYP46A1Q9Y6A2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 AC007225.1-201ENST00000566331 1836 ntBASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CYP46A1Q9Y6A2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
CYP46A1Q9Y6A2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 SLC7A5P2-201ENST00000553010 536 ntBASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CYP46A1Q9Y6A2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 AC004854.2-201ENST00000608450 1441 ntBASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 AC073130.3-201ENST00000624389 2278 ntBASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 AC245052.3-201ENST00000450182 901 ntBASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 AC073314.1-201ENST00000568729 2216 ntBASIC24.53■■□□□ 1.52
CYP46A1Q9Y6A2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 AP005212.1-201ENST00000581547 1997 ntBASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CYP46A1Q9Y6A2 AC092667.1-201ENST00000434301 2586 ntBASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms