Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 AC231657.2-201ENST00000624556 255 ntBASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGA4Q9Y5G9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA4Q9Y5G9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 GUSBP6-202ENST00000438529 1198 ntBASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 SLC7A5P2-201ENST00000553010 536 ntBASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 AC104187.1-201ENST00000607510 612 ntBASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA4Q9Y5G9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 AC007322.1-201ENST00000426983 750 ntBASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 AC005181.1-201ENST00000604782 1256 ntBASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 KRT87P-202ENST00000534226 1464 ntBASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA4Q9Y5G9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 DUX4L16-201ENST00000555130 1264 ntBASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 AL138781.1-201ENST00000566567 1274 ntBASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA4Q9Y5G9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA4Q9Y5G9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA4Q9Y5G9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms