Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TIMMDC1Q9NPL8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.83■□□□□ 0.77
TIMMDC1Q9NPL8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.83■□□□□ 0.77
TIMMDC1Q9NPL8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TIMMDC1Q9NPL8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 AC087289.5-201ENST00000586076 3175 ntBASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TIMMDC1Q9NPL8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.82■□□□□ 0.76
TIMMDC1Q9NPL8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 AL137784.2-201ENST00000607332 1000 ntBASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 AC009237.3-201ENST00000393279 1427 ntBASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TIMMDC1Q9NPL8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TIMMDC1Q9NPL8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TIMMDC1Q9NPL8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TIMMDC1Q9NPL8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms