Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CNN2P6-201ENST00000439038 900 ntBASIC21.66■■□□□ 1.06
CD248Q9HCU0 AC010141.2-201ENST00000452426 721 ntBASIC21.66■■□□□ 1.06
CD248Q9HCU0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 LINC01521-201ENST00000504184 1943 ntBASIC21.66■■□□□ 1.06
CD248Q9HCU0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.66■■□□□ 1.06
CD248Q9HCU0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD248Q9HCU0 AP004607.7-201ENST00000527152 1677 ntBASIC21.66■■□□□ 1.06
CD248Q9HCU0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 AC083906.2-201ENST00000511578 360 ntBASIC21.65■■□□□ 1.06
CD248Q9HCU0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 AL121832.2-201ENST00000610979 668 ntBASIC21.65■■□□□ 1.06
CD248Q9HCU0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD248Q9HCU0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.65■■□□□ 1.06
CD248Q9HCU0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CD248Q9HCU0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CD248Q9HCU0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
CD248Q9HCU0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CD248Q9HCU0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD248Q9HCU0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 AC007322.1-201ENST00000426983 750 ntBASIC21.64■■□□□ 1.05
CD248Q9HCU0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD248Q9HCU0 FAM99A-202ENST00000538190 1989 ntBASIC21.64■■□□□ 1.05
CD248Q9HCU0 AC080038.3-201ENST00000623346 1952 ntBASIC21.64■■□□□ 1.05
CD248Q9HCU0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD248Q9HCU0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD248Q9HCU0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD248Q9HCU0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 AC005181.1-201ENST00000604782 1256 ntBASIC21.63■■□□□ 1.05
CD248Q9HCU0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD248Q9HCU0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD248Q9HCU0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD248Q9HCU0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
CD248Q9HCU0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CD248Q9HCU0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.62■■□□□ 1.05
CD248Q9HCU0 KRT18P20-201ENST00000548986 1279 ntBASIC21.62■■□□□ 1.05
CD248Q9HCU0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.62■■□□□ 1.05
CD248Q9HCU0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.62■■□□□ 1.05
CD248Q9HCU0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
CD248Q9HCU0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD248Q9HCU0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CD248Q9HCU0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD248Q9HCU0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.61■■□□□ 1.05
CD248Q9HCU0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms