Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SND1-IT1Q9HBX3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SND1-IT1Q9HBX3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 AC087289.5-201ENST00000586076 3175 ntBASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SND1-IT1Q9HBX3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 AC006455.2-201ENST00000429931 906 ntBASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 AC239859.2-201ENST00000444165 318 ntBASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 AL034346.1-201ENST00000568244 1277 ntBASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SND1-IT1Q9HBX3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SND1-IT1Q9HBX3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms