Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 AC005332.7-201ENST00000614046 2005 ntBASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 LETM1P2-201ENST00000597330 2178 ntBASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VIPAS39Q9H9C1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 AC087239.1-201ENST00000622671 572 ntBASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
VIPAS39Q9H9C1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 AC133637.1-201ENST00000624115 1537 ntBASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
VIPAS39Q9H9C1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 DUX4L18-201ENST00000553347 1267 ntBASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 AL451085.2-201ENST00000605085 799 ntBASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
VIPAS39Q9H9C1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 AC026471.1-201ENST00000564629 3026 ntBASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 AC010141.3-201ENST00000456659 717 ntBASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VIPAS39Q9H9C1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VIPAS39Q9H9C1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms