Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC139530.1-201ENST00000575312 1977 ntBASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 MKRN4P-201ENST00000444706 1521 ntBASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SCAF1Q9H7N4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.71■■■□□ 2.51
SCAF1Q9H7N4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
SCAF1Q9H7N4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.7■■■□□ 2.51
SCAF1Q9H7N4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.7■■■□□ 2.51
SCAF1Q9H7N4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
SCAF1Q9H7N4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.7■■■□□ 2.5
SCAF1Q9H7N4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.69■■■□□ 2.5
SCAF1Q9H7N4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 REXO1L12P-201ENST00000622156 912 ntBASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 Z99916.3-201ENST00000623422 1080 ntBASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.68■■■□□ 2.5
SCAF1Q9H7N4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SCAF1Q9H7N4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC30.67■■■□□ 2.5
SCAF1Q9H7N4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 LINC01023-201ENST00000606054 436 ntBASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SCAF1Q9H7N4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AC083880.1-201ENST00000608266 535 ntBASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SCAF1Q9H7N4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SCAF1Q9H7N4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms