Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCNX3Q9H6A9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 AC245052.3-201ENST00000450182 901 ntBASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCNX3Q9H6A9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.83■□□□□ 0.61
PCNX3Q9H6A9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 TERF1P5-201ENST00000477545 1207 ntBASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCNX3Q9H6A9 AC116050.2-201ENST00000612102 1779 ntBASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 AC016405.3-201ENST00000607710 860 ntBASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCNX3Q9H6A9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 AL049796.1-201ENST00000565336 1766 ntBASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 AL355472.2-201ENST00000422958 438 ntBASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 AC080038.1-201ENST00000611274 1154 ntBASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 AC006128.1-201ENST00000624704 1661 ntBASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCNX3Q9H6A9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 MIR2861-201ENST00000636310 90 ntBASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms