Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDCP1Q9H5V8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCP1Q9H5V8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.3■□□□□ 0.68
CDCP1Q9H5V8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 OR10C1-204ENST00000622521 1039 ntBASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCP1Q9H5V8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 AC245052.3-201ENST00000450182 901 ntBASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 AL138781.1-201ENST00000566567 1274 ntBASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 AC016405.3-201ENST00000607710 860 ntBASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCP1Q9H5V8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 AC142086.2-201ENST00000569753 217 ntBASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCP1Q9H5V8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCP1Q9H5V8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCP1Q9H5V8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCP1Q9H5V8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCP1Q9H5V8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 AC093787.1-201ENST00000450396 207 ntBASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.26■□□□□ 0.67
CDCP1Q9H5V8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 MKRN4P-201ENST00000444706 1521 ntBASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.25■□□□□ 0.67
CDCP1Q9H5V8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms